Top 10 genes with highest correlation to Rv1205/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2808/- | (cc=0.5379) | info on Rv2808/- |
| Rv2444c/rne | (cc=0.5325) | info on Rv2444c/rne |
| Rv0668/rpoC | (cc=0.5262) | info on Rv0668/rpoC |
| Rv3697c/vapC48 | (cc=0.5259) | info on Rv3697c/vapC48 |
| Rv1072/- | (cc=0.5009) | info on Rv1072/- |
| Rv1204c/- | (cc=0.4958) | info on Rv1204c/- |
| Rv2940c/mas | (cc=0.4738) | info on Rv2940c/mas |
| Rv3419c/gcp | (cc=0.4716) | info on Rv3419c/gcp |
| Rv1913/- | (cc=0.4704) | info on Rv1913/- |
| Rv2841c/nusA | (cc=0.4636) | info on Rv2841c/nusA |
Correlation of Rv1205/- with Rv1072/-
Normalized LFCs for Rv1205/-:
(description and provenance of datasets)
| Rv1205/- | Rv1072/- | |
| Fe_supp_jason_reseq | 0.646 | 3.452 |
| low_pH_jason_reseq | 2.096 | 0.709 |
| NO_jason_reseq | 1.546 | -0.205 |
| B6_jason_reseq | 0.654 | 1.58 |
| MHCII_jason_reseq | -0.629 | 0.0 |
| Isoniazid02 | -3.239 | -2.007 |
| Rifampicin4 | -0.246 | -0.653 |
| Ethambutol3 | 1.653 | 3.263 |
| Meropenem3 | 1.379 | 0.586 |
| Vancomycin16 | 0.363 | -0.727 |
| Rv2680_day32 | -2.474 | -0.803 |
| H37Rv_KO_MarP | 0.446 | -2.718 |
| hypoxia_3wks | -0.738 | 0.0 |
| hypoxia_6wks | 1.777 | 1.451 |
| glycerol | 0.146 | 0.089 |
| cholesterol | 1.103 | -1.261 |
| AJ | -0.111 | 0.948 |
| Bibs02 | -1.342 | 0.747 |
| Bibs02c | -1.658 | 0.653 |
| BL6 | 0.101 | 2.081 |
| BL6a | -0.895 | 1.728 |
| BXD01 | 1.127 | 3.146 |
| BXD010 | 1.113 | 2.277 |
| BXD011 | 0.035 | 3.036 |
| BXD03 | 0.454 | 2.899 |
| BXD04 | 1.045 | 5.696 |
| BXD05 | 0.144 | 2.5 |
| BXD06 | 0.448 | 2.909 |
| BXD07 | -0.386 | 2.518 |
| BXD08 | 1.2 | 3.668 |
| BXD09 | -0.26 | 1.736 |
| CAST | 2.409 | 4.513 |
| CCcont | 0.108 | 2.429 |
| DS01 | -0.044 | 0.965 |
| DS02 | 2.182 | 0.821 |
| DS04 | -0.132 | 0.793 |
| DS0c | -0.8 | 0.748 |
| GP01 | -1.821 | 0.0 |
| GP02 | -0.627 | -0.166 |
| GP0c | -1.084 | -0.26 |
| NOD | 1.028 | 1.87 |
| NZO | -0.038 | 0.815 |
| PWK | 2.781 | 2.865 |
| H37Rv_KO_CtpC | 0.693 | 3.557 |
| H37Rv_KO_CtpD | -0.708 | 1.054 |
| H37Rv_KO_Rv1272 | 0.0 | 1.837 |
| H37Rv_KO_SugABC | 1.421 | 1.948 |
| H37Rv_KO_MbtN | -0.645 | 2.179 |
| Trans05 | 0.645 | 2.15 |
| macrophage_unactivated | -2.421 | -1.13 |
| IL1 | -3.636 | -1.949 |
| Rapamycin | -2.13 | -2.961 |
| Tcell | 0.036 | 1.466 |
| GMCSF | -2.498 | -1.191 |
| IFNab | -0.206 | 0.0 |
| IFNg | -2.416 | -1.756 |
| IFNg_GMCSF1 | -1.046 | -0.465 |
| Rv1432_day32 | -2.956 | -0.887 |
| Rv1565c_day32 | -0.409 | 0.401 |
| secA2_input | 0.294 | 1.079 |
| delta_Rv3594 | -0.375 | -0.846 |
| delta_Rv3717 | 1.396 | -2.079 |
| delta_Rv3811 | 0.471 | -0.717 |
| delta_Rv0954 | -1.085 | -2.135 |
| PonA1 | -0.993 | -1.272 |
| EccD1_KO | -1.2 | 1.312 |
| EspI_KO | -1.494 | 1.041 |
| PE35_KO | -0.499 | 0.306 |
| PPE68_KO | -1.28 | 0.653 |
| glycerol2 | -0.154 | -0.451 |
| lignocerate | 0.443 | -0.897 |
| oleate | -1.358 | -0.588 |
| phosphatidylcholine | 1.301 | -1.207 |
| acetate | -0.241 | -0.535 |
| glucAc | 0.074 | 0.554 |
| Rv0950ko | -0.289 | 0.28 |
| Rv1096ko | -0.142 | 2.524 |
| Rv3684ko | -1.055 | 2.6 |
| delta_otsA_trehalose | -0.29 | -1.013 |