Top 10 genes with highest correlation to Rv1149/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1042c/- | (cc=0.8949) | info on Rv1042c/- |
| Rv1041c/- | (cc=0.5896) | info on Rv1041c/- |
| Rv1135c/PPE16 | (cc=0.5268) | info on Rv1135c/PPE16 |
| Rv2673/aftC | (cc=0.481) | info on Rv2673/aftC |
| Rv2270/lppN | (cc=0.4556) | info on Rv2270/lppN |
| Rv1773c/- | (cc=0.4541) | info on Rv1773c/- |
| Rv3392c/cmaA1 | (cc=0.4458) | info on Rv3392c/cmaA1 |
| Rv2811/- | (cc=0.4378) | info on Rv2811/- |
| Rv2854/- | (cc=0.4282) | info on Rv2854/- |
| Rv0817c/- | (cc=0.4256) | info on Rv0817c/- |
Correlation of Rv1149/- with Rv2854/-
Normalized LFCs for Rv1149/-:
(description and provenance of datasets)
| Rv1149/- | Rv2854/- | |
| Fe_supp_jason_reseq | -1.566 | -0.189 |
| low_pH_jason_reseq | -1.532 | -0.485 |
| NO_jason_reseq | -0.37 | -0.457 |
| B6_jason_reseq | 0.532 | -0.093 |
| MHCII_jason_reseq | 0.553 | 0.78 |
| Isoniazid02 | 0.048 | -0.627 |
| Rifampicin4 | 1.235 | 0.547 |
| Ethambutol3 | 0.495 | 0.963 |
| Meropenem3 | 0.767 | -1.072 |
| Vancomycin16 | 0.499 | 0.082 |
| Rv2680_day32 | -0.613 | -0.161 |
| H37Rv_KO_MarP | 0.073 | -0.443 |
| hypoxia_3wks | 1.236 | 0.447 |
| hypoxia_6wks | 1.347 | -0.123 |
| glycerol | 0.255 | -0.455 |
| cholesterol | 0.146 | -0.48 |
| AJ | 0.813 | 0.163 |
| Bibs02 | 0.287 | -0.449 |
| Bibs02c | 1.363 | -0.196 |
| BL6 | -0.264 | 0.248 |
| BL6a | 0.913 | 0.0 |
| BXD01 | 0.281 | -0.168 |
| BXD010 | 0.804 | 0.119 |
| BXD011 | -0.142 | -0.494 |
| BXD03 | 0.807 | -0.238 |
| BXD04 | -0.546 | 0.326 |
| BXD05 | 0.505 | 0.545 |
| BXD06 | 0.326 | -0.21 |
| BXD07 | 0.399 | 0.097 |
| BXD08 | -0.707 | 0.053 |
| BXD09 | 0.493 | -0.094 |
| CAST | 0.232 | -0.976 |
| CCcont | -0.865 | -0.561 |
| DS01 | 0.743 | 0.094 |
| DS02 | 0.432 | -0.09 |
| DS04 | 0.195 | 0.136 |
| DS0c | 0.03 | -0.222 |
| GP01 | -2.51 | -1.208 |
| GP02 | -1.23 | -1.538 |
| GP0c | -0.676 | -0.616 |
| NOD | 1.751 | -0.483 |
| NZO | 0.0 | -0.204 |
| PWK | 0.895 | -0.831 |
| H37Rv_KO_CtpC | 3.594 | 0.621 |
| H37Rv_KO_CtpD | 1.213 | -0.507 |
| H37Rv_KO_Rv1272 | 0.01 | -0.598 |
| H37Rv_KO_SugABC | -1.653 | -0.742 |
| H37Rv_KO_MbtN | 0.607 | -0.296 |
| Trans05 | 0.951 | -0.417 |
| macrophage_unactivated | -0.432 | 0.732 |
| IL1 | 0.059 | -0.282 |
| Rapamycin | 0.092 | 0.239 |
| Tcell | 0.254 | 0.075 |
| GMCSF | 0.106 | -0.349 |
| IFNab | -0.184 | -0.142 |
| IFNg | -0.136 | 0.62 |
| IFNg_GMCSF1 | -0.063 | 0.412 |
| Rv1432_day32 | 0.658 | -0.196 |
| Rv1565c_day32 | 1.054 | 0.859 |
| secA2_input | 0.734 | 0.402 |
| delta_Rv3594 | 0.165 | 0.052 |
| delta_Rv3717 | 1.187 | 0.793 |
| delta_Rv3811 | 0.745 | 1.034 |
| delta_Rv0954 | 0.933 | 1.358 |
| PonA1 | -0.591 | 1.193 |
| EccD1_KO | 1.885 | 0.329 |
| EspI_KO | 1.6 | -0.148 |
| PE35_KO | 1.671 | -0.312 |
| PPE68_KO | 2.451 | 0.054 |
| glycerol2 | -0.719 | -0.652 |
| lignocerate | -0.865 | -0.783 |
| oleate | -0.293 | 0.011 |
| phosphatidylcholine | -0.629 | -0.588 |
| acetate | -0.547 | -0.716 |
| glucAc | -0.572 | -1.548 |
| Rv0950ko | 0.859 | 0.678 |
| Rv1096ko | 1.517 | 0.679 |
| Rv3684ko | 0.933 | 0.383 |
| delta_otsA_trehalose | -0.873 | -2.484 |