Top 10 genes with highest correlation to Rv1149/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1042c/- | (cc=0.8949) | info on Rv1042c/- |
| Rv1041c/- | (cc=0.5896) | info on Rv1041c/- |
| Rv1135c/PPE16 | (cc=0.5268) | info on Rv1135c/PPE16 |
| Rv2673/aftC | (cc=0.481) | info on Rv2673/aftC |
| Rv2270/lppN | (cc=0.4556) | info on Rv2270/lppN |
| Rv1773c/- | (cc=0.4541) | info on Rv1773c/- |
| Rv3392c/cmaA1 | (cc=0.4458) | info on Rv3392c/cmaA1 |
| Rv2811/- | (cc=0.4378) | info on Rv2811/- |
| Rv2854/- | (cc=0.4282) | info on Rv2854/- |
| Rv0817c/- | (cc=0.4256) | info on Rv0817c/- |
Correlation of Rv1149/- with Rv0817c/-
Normalized LFCs for Rv1149/-:
(description and provenance of datasets)
| Rv1149/- | Rv0817c/- | |
| Fe_supp_jason_reseq | -1.566 | -1.397 |
| low_pH_jason_reseq | -1.532 | -0.156 |
| NO_jason_reseq | -0.37 | 0.969 |
| B6_jason_reseq | 0.532 | -1.11 |
| MHCII_jason_reseq | 0.553 | -0.71 |
| Isoniazid02 | 0.048 | 0.528 |
| Rifampicin4 | 1.235 | -0.29 |
| Ethambutol3 | 0.495 | 0.235 |
| Meropenem3 | 0.767 | -0.266 |
| Vancomycin16 | 0.499 | 0.0 |
| Rv2680_day32 | -0.613 | 0.235 |
| H37Rv_KO_MarP | 0.073 | -0.2 |
| hypoxia_3wks | 1.236 | 1.655 |
| hypoxia_6wks | 1.347 | 0.633 |
| glycerol | 0.255 | -0.459 |
| cholesterol | 0.146 | -1.507 |
| AJ | 0.813 | -0.805 |
| Bibs02 | 0.287 | -0.522 |
| Bibs02c | 1.363 | -0.537 |
| BL6 | -0.264 | -1.995 |
| BL6a | 0.913 | -1.263 |
| BXD01 | 0.281 | -0.582 |
| BXD010 | 0.804 | -1.115 |
| BXD011 | -0.142 | -0.71 |
| BXD03 | 0.807 | -1.177 |
| BXD04 | -0.546 | -0.896 |
| BXD05 | 0.505 | -0.802 |
| BXD06 | 0.326 | -0.422 |
| BXD07 | 0.399 | -1.206 |
| BXD08 | -0.707 | -1.756 |
| BXD09 | 0.493 | -1.551 |
| CAST | 0.232 | -0.337 |
| CCcont | -0.865 | -2.382 |
| DS01 | 0.743 | -0.407 |
| DS02 | 0.432 | -0.375 |
| DS04 | 0.195 | 0.852 |
| DS0c | 0.03 | -1.475 |
| GP01 | -2.51 | -1.575 |
| GP02 | -1.23 | -1.244 |
| GP0c | -0.676 | -0.884 |
| NOD | 1.751 | 0.0 |
| NZO | 0.0 | 0.131 |
| PWK | 0.895 | 0.171 |
| H37Rv_KO_CtpC | 3.594 | -0.37 |
| H37Rv_KO_CtpD | 1.213 | -1.103 |
| H37Rv_KO_Rv1272 | 0.01 | -0.362 |
| H37Rv_KO_SugABC | -1.653 | -1.391 |
| H37Rv_KO_MbtN | 0.607 | -1.011 |
| Trans05 | 0.951 | 0.667 |
| macrophage_unactivated | -0.432 | -0.701 |
| IL1 | 0.059 | -0.427 |
| Rapamycin | 0.092 | -1.795 |
| Tcell | 0.254 | -1.277 |
| GMCSF | 0.106 | -1.035 |
| IFNab | -0.184 | -1.466 |
| IFNg | -0.136 | -2.494 |
| IFNg_GMCSF1 | -0.063 | 0.412 |
| Rv1432_day32 | 0.658 | 0.583 |
| Rv1565c_day32 | 1.054 | 0.338 |
| secA2_input | 0.734 | -0.238 |
| delta_Rv3594 | 0.165 | 1.19 |
| delta_Rv3717 | 1.187 | 0.901 |
| delta_Rv3811 | 0.745 | -0.159 |
| delta_Rv0954 | 0.933 | 0.57 |
| PonA1 | -0.591 | 0.594 |
| EccD1_KO | 1.885 | 0.187 |
| EspI_KO | 1.6 | -0.342 |
| PE35_KO | 1.671 | 1.17 |
| PPE68_KO | 2.451 | 0.841 |
| glycerol2 | -0.719 | -1.244 |
| lignocerate | -0.865 | -1.587 |
| oleate | -0.293 | -0.885 |
| phosphatidylcholine | -0.629 | -0.637 |
| acetate | -0.547 | -1.14 |
| glucAc | -0.572 | -1.952 |
| Rv0950ko | 0.859 | -0.395 |
| Rv1096ko | 1.517 | -0.609 |
| Rv3684ko | 0.933 | 0.58 |
| delta_otsA_trehalose | -0.873 | -0.111 |