Top 10 genes with highest correlation to Rv1149/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1042c/- | (cc=0.8949) | info on Rv1042c/- |
| Rv1041c/- | (cc=0.5896) | info on Rv1041c/- |
| Rv1135c/PPE16 | (cc=0.5268) | info on Rv1135c/PPE16 |
| Rv2673/aftC | (cc=0.481) | info on Rv2673/aftC |
| Rv2270/lppN | (cc=0.4556) | info on Rv2270/lppN |
| Rv1773c/- | (cc=0.4541) | info on Rv1773c/- |
| Rv3392c/cmaA1 | (cc=0.4458) | info on Rv3392c/cmaA1 |
| Rv2811/- | (cc=0.4378) | info on Rv2811/- |
| Rv2854/- | (cc=0.4282) | info on Rv2854/- |
| Rv0817c/- | (cc=0.4256) | info on Rv0817c/- |
Correlation of Rv1149/- with Rv1041c/-
Normalized LFCs for Rv1149/-:
(description and provenance of datasets)
| Rv1149/- | Rv1041c/- | |
| Fe_supp_jason_reseq | -1.566 | -0.717 |
| low_pH_jason_reseq | -1.532 | -0.604 |
| NO_jason_reseq | -0.37 | 0.034 |
| B6_jason_reseq | 0.532 | 0.426 |
| MHCII_jason_reseq | 0.553 | 0.427 |
| Isoniazid02 | 0.048 | -0.191 |
| Rifampicin4 | 1.235 | 0.555 |
| Ethambutol3 | 0.495 | -0.009 |
| Meropenem3 | 0.767 | 0.246 |
| Vancomycin16 | 0.499 | 0.077 |
| Rv2680_day32 | -0.613 | 0.092 |
| H37Rv_KO_MarP | 0.073 | 0.443 |
| hypoxia_3wks | 1.236 | 0.463 |
| hypoxia_6wks | 1.347 | 0.388 |
| glycerol | 0.255 | 0.301 |
| cholesterol | 0.146 | 0.111 |
| AJ | 0.813 | 0.467 |
| Bibs02 | 0.287 | -0.025 |
| Bibs02c | 1.363 | 0.878 |
| BL6 | -0.264 | -0.511 |
| BL6a | 0.913 | 0.209 |
| BXD01 | 0.281 | -0.127 |
| BXD010 | 0.804 | -0.277 |
| BXD011 | -0.142 | -0.311 |
| BXD03 | 0.807 | -0.22 |
| BXD04 | -0.546 | -0.262 |
| BXD05 | 0.505 | -0.019 |
| BXD06 | 0.326 | -0.157 |
| BXD07 | 0.399 | -0.602 |
| BXD08 | -0.707 | -0.325 |
| BXD09 | 0.493 | -0.392 |
| CAST | 0.232 | 0.317 |
| CCcont | -0.865 | -0.997 |
| DS01 | 0.743 | 0.424 |
| DS02 | 0.432 | 0.282 |
| DS04 | 0.195 | 0.419 |
| DS0c | 0.03 | 0.229 |
| GP01 | -2.51 | -0.156 |
| GP02 | -1.23 | -0.086 |
| GP0c | -0.676 | -1.031 |
| NOD | 1.751 | 0.901 |
| NZO | 0.0 | -0.337 |
| PWK | 0.895 | 0.601 |
| H37Rv_KO_CtpC | 3.594 | 1.289 |
| H37Rv_KO_CtpD | 1.213 | 0.169 |
| H37Rv_KO_Rv1272 | 0.01 | -0.104 |
| H37Rv_KO_SugABC | -1.653 | -0.259 |
| H37Rv_KO_MbtN | 0.607 | 0.018 |
| Trans05 | 0.951 | -0.006 |
| macrophage_unactivated | -0.432 | -1.048 |
| IL1 | 0.059 | -0.833 |
| Rapamycin | 0.092 | -1.117 |
| Tcell | 0.254 | -0.916 |
| GMCSF | 0.106 | -0.462 |
| IFNab | -0.184 | -0.973 |
| IFNg | -0.136 | -1.328 |
| IFNg_GMCSF1 | -0.063 | -0.267 |
| Rv1432_day32 | 0.658 | 0.232 |
| Rv1565c_day32 | 1.054 | 0.319 |
| secA2_input | 0.734 | 0.402 |
| delta_Rv3594 | 0.165 | -0.48 |
| delta_Rv3717 | 1.187 | -0.269 |
| delta_Rv3811 | 0.745 | -0.613 |
| delta_Rv0954 | 0.933 | -0.112 |
| PonA1 | -0.591 | -0.196 |
| EccD1_KO | 1.885 | 0.618 |
| EspI_KO | 1.6 | 0.559 |
| PE35_KO | 1.671 | 0.648 |
| PPE68_KO | 2.451 | 0.429 |
| glycerol2 | -0.719 | -0.13 |
| lignocerate | -0.865 | -0.354 |
| oleate | -0.293 | 0.25 |
| phosphatidylcholine | -0.629 | 0.01 |
| acetate | -0.547 | -0.218 |
| glucAc | -0.572 | -0.478 |
| Rv0950ko | 0.859 | 0.353 |
| Rv1096ko | 1.517 | 0.48 |
| Rv3684ko | 0.933 | -0.062 |
| delta_otsA_trehalose | -0.873 | 0.558 |