Top 10 genes with highest correlation to Rv1089/PE10:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1367c/- | (cc=0.5889) | info on Rv1367c/- |
| Rv2015c/- | (cc=0.5744) | info on Rv2015c/- |
| Rv2559c/- | (cc=0.574) | info on Rv2559c/- |
| Rv1737c/narK2 | (cc=0.5677) | info on Rv1737c/narK2 |
| Rv2490c/PE_PGRS43 | (cc=0.5674) | info on Rv2490c/PE_PGRS43 |
| Rv0623/vapB30 | (cc=0.5617) | info on Rv0623/vapB30 |
| Rv0359/- | (cc=0.544) | info on Rv0359/- |
| Rv2340c/PE_PGRS39 | (cc=0.5391) | info on Rv2340c/PE_PGRS39 |
| Rv1032c/trcS | (cc=0.5366) | info on Rv1032c/trcS |
| Rv1765c/- | (cc=0.5314) | info on Rv1765c/- |
Correlation of Rv1089/PE10 with Rv2490c/PE_PGRS43
Normalized LFCs for Rv1089/PE10:
(description and provenance of datasets)
| Rv1089/PE10 | Rv2490c/PE_PGRS43 | |
| Fe_supp_jason_reseq | 2.729 | -0.684 |
| low_pH_jason_reseq | -1.549 | -0.584 |
| NO_jason_reseq | 1.467 | -0.084 |
| B6_jason_reseq | 1.672 | 0.242 |
| MHCII_jason_reseq | 2.369 | 1.054 |
| Isoniazid02 | 0.53 | 0.659 |
| Rifampicin4 | 1.633 | 0.439 |
| Ethambutol3 | 3.017 | 0.323 |
| Meropenem3 | 1.224 | 0.284 |
| Vancomycin16 | 0.727 | 0.22 |
| Rv2680_day32 | -0.131 | -0.203 |
| H37Rv_KO_MarP | 1.531 | 0.154 |
| hypoxia_3wks | -0.407 | -0.267 |
| hypoxia_6wks | -1.585 | -0.576 |
| glycerol | 2.092 | 1.437 |
| cholesterol | -0.197 | 0.837 |
| AJ | 1.782 | 0.489 |
| Bibs02 | 1.062 | 0.657 |
| Bibs02c | 0.433 | 0.327 |
| BL6 | -2.751 | -0.498 |
| BL6a | -0.682 | -0.319 |
| BXD01 | -1.73 | -0.435 |
| BXD010 | -1.438 | -0.72 |
| BXD011 | -0.659 | -0.716 |
| BXD03 | -1.087 | -0.513 |
| BXD04 | -0.864 | -0.369 |
| BXD05 | 0.236 | -0.248 |
| BXD06 | -1.403 | -0.75 |
| BXD07 | -2.116 | -0.794 |
| BXD08 | -1.596 | -0.648 |
| BXD09 | -1.091 | -0.729 |
| CAST | 0.617 | 0.255 |
| CCcont | -1.854 | -1.368 |
| DS01 | -0.498 | 0.205 |
| DS02 | -1.218 | -0.014 |
| DS04 | 0.614 | 0.679 |
| DS0c | 0.938 | -0.16 |
| GP01 | 1.922 | 0.013 |
| GP02 | 0.613 | 0.675 |
| GP0c | 2.39 | -0.2 |
| NOD | -1.57 | -0.329 |
| NZO | 1.445 | 0.051 |
| PWK | 0.19 | -0.065 |
| H37Rv_KO_CtpC | -0.268 | -0.95 |
| H37Rv_KO_CtpD | 0.315 | 0.314 |
| H37Rv_KO_Rv1272 | -2.007 | -0.471 |
| H37Rv_KO_SugABC | -1.076 | -0.19 |
| H37Rv_KO_MbtN | -0.43 | -0.027 |
| Trans05 | -0.236 | -0.133 |
| macrophage_unactivated | -1.424 | -1.092 |
| IL1 | -0.676 | -1.026 |
| Rapamycin | -2.756 | -0.301 |
| Tcell | -2.326 | -1.225 |
| GMCSF | -3.137 | 0.092 |
| IFNab | -0.447 | -1.23 |
| IFNg | -0.294 | -1.048 |
| IFNg_GMCSF1 | -2.064 | -0.189 |
| Rv1432_day32 | 0.0 | 0.025 |
| Rv1565c_day32 | 0.0 | 0.021 |
| secA2_input | 1.315 | 0.166 |
| delta_Rv3594 | -0.45 | 0.199 |
| delta_Rv3717 | -0.37 | 0.118 |
| delta_Rv3811 | 0.033 | -0.294 |
| delta_Rv0954 | -0.527 | -0.329 |
| PonA1 | -2.233 | -0.216 |
| EccD1_KO | 1.924 | 0.342 |
| EspI_KO | 0.0 | 0.026 |
| PE35_KO | 3.652 | 0.204 |
| PPE68_KO | 2.62 | 0.198 |
| glycerol2 | 0.27 | 0.07 |
| lignocerate | 0.684 | -0.129 |
| oleate | -1.323 | 0.373 |
| phosphatidylcholine | 0.183 | 0.308 |
| acetate | 0.321 | 0.216 |
| glucAc | -0.405 | 0.101 |
| Rv0950ko | 1.155 | 0.88 |
| Rv1096ko | -0.293 | 0.392 |
| Rv3684ko | 1.333 | 0.488 |
| delta_otsA_trehalose | -1.776 | -1.402 |