Top 10 genes with highest correlation to Rv1089/PE10:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1367c/- | (cc=0.5889) | info on Rv1367c/- |
| Rv2015c/- | (cc=0.5744) | info on Rv2015c/- |
| Rv2559c/- | (cc=0.574) | info on Rv2559c/- |
| Rv1737c/narK2 | (cc=0.5677) | info on Rv1737c/narK2 |
| Rv2490c/PE_PGRS43 | (cc=0.5674) | info on Rv2490c/PE_PGRS43 |
| Rv0623/vapB30 | (cc=0.5617) | info on Rv0623/vapB30 |
| Rv0359/- | (cc=0.544) | info on Rv0359/- |
| Rv2340c/PE_PGRS39 | (cc=0.5391) | info on Rv2340c/PE_PGRS39 |
| Rv1032c/trcS | (cc=0.5366) | info on Rv1032c/trcS |
| Rv1765c/- | (cc=0.5314) | info on Rv1765c/- |
Correlation of Rv1089/PE10 with Rv2340c/PE_PGRS39
Normalized LFCs for Rv1089/PE10:
(description and provenance of datasets)
| Rv1089/PE10 | Rv2340c/PE_PGRS39 | |
| Fe_supp_jason_reseq | 2.729 | -0.063 |
| low_pH_jason_reseq | -1.549 | -0.452 |
| NO_jason_reseq | 1.467 | -0.417 |
| B6_jason_reseq | 1.672 | 0.657 |
| MHCII_jason_reseq | 2.369 | 0.619 |
| Isoniazid02 | 0.53 | 1.157 |
| Rifampicin4 | 1.633 | 0.485 |
| Ethambutol3 | 3.017 | 1.549 |
| Meropenem3 | 1.224 | 0.728 |
| Vancomycin16 | 0.727 | 0.061 |
| Rv2680_day32 | -0.131 | -0.465 |
| H37Rv_KO_MarP | 1.531 | -0.302 |
| hypoxia_3wks | -0.407 | -0.774 |
| hypoxia_6wks | -1.585 | -0.666 |
| glycerol | 2.092 | 0.65 |
| cholesterol | -0.197 | 0.315 |
| AJ | 1.782 | 0.565 |
| Bibs02 | 1.062 | 0.984 |
| Bibs02c | 0.433 | 0.679 |
| BL6 | -2.751 | -0.16 |
| BL6a | -0.682 | 0.014 |
| BXD01 | -1.73 | -0.58 |
| BXD010 | -1.438 | -0.687 |
| BXD011 | -0.659 | -0.737 |
| BXD03 | -1.087 | -0.566 |
| BXD04 | -0.864 | 0.035 |
| BXD05 | 0.236 | -0.068 |
| BXD06 | -1.403 | -0.939 |
| BXD07 | -2.116 | -0.624 |
| BXD08 | -1.596 | -0.277 |
| BXD09 | -1.091 | -0.626 |
| CAST | 0.617 | 0.794 |
| CCcont | -1.854 | -0.278 |
| DS01 | -0.498 | 0.956 |
| DS02 | -1.218 | 0.993 |
| DS04 | 0.614 | 0.45 |
| DS0c | 0.938 | 0.94 |
| GP01 | 1.922 | -0.24 |
| GP02 | 0.613 | 0.643 |
| GP0c | 2.39 | -0.111 |
| NOD | -1.57 | -0.218 |
| NZO | 1.445 | 0.48 |
| PWK | 0.19 | 0.672 |
| H37Rv_KO_CtpC | -0.268 | -0.891 |
| H37Rv_KO_CtpD | 0.315 | -0.009 |
| H37Rv_KO_Rv1272 | -2.007 | 0.232 |
| H37Rv_KO_SugABC | -1.076 | 0.386 |
| H37Rv_KO_MbtN | -0.43 | 0.239 |
| Trans05 | -0.236 | 0.28 |
| macrophage_unactivated | -1.424 | -1.004 |
| IL1 | -0.676 | -0.736 |
| Rapamycin | -2.756 | -0.62 |
| Tcell | -2.326 | -0.978 |
| GMCSF | -3.137 | -0.747 |
| IFNab | -0.447 | -0.429 |
| IFNg | -0.294 | -0.526 |
| IFNg_GMCSF1 | -2.064 | -0.154 |
| Rv1432_day32 | 0.0 | 0.352 |
| Rv1565c_day32 | 0.0 | 0.051 |
| secA2_input | 1.315 | 0.512 |
| delta_Rv3594 | -0.45 | -0.207 |
| delta_Rv3717 | -0.37 | -0.44 |
| delta_Rv3811 | 0.033 | -0.007 |
| delta_Rv0954 | -0.527 | 0.172 |
| PonA1 | -2.233 | -0.128 |
| EccD1_KO | 1.924 | 0.697 |
| EspI_KO | 0.0 | 0.211 |
| PE35_KO | 3.652 | 0.117 |
| PPE68_KO | 2.62 | 0.038 |
| glycerol2 | 0.27 | -0.041 |
| lignocerate | 0.684 | 0.516 |
| oleate | -1.323 | 0.0 |
| phosphatidylcholine | 0.183 | 0.494 |
| acetate | 0.321 | 0.116 |
| glucAc | -0.405 | 0.086 |
| Rv0950ko | 1.155 | 0.555 |
| Rv1096ko | -0.293 | -0.537 |
| Rv3684ko | 1.333 | -0.442 |
| delta_otsA_trehalose | -1.776 | -0.722 |