Top 10 genes with highest correlation to Rv1089/PE10:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1367c/- | (cc=0.5889) | info on Rv1367c/- |
| Rv2015c/- | (cc=0.5744) | info on Rv2015c/- |
| Rv2559c/- | (cc=0.574) | info on Rv2559c/- |
| Rv1737c/narK2 | (cc=0.5677) | info on Rv1737c/narK2 |
| Rv2490c/PE_PGRS43 | (cc=0.5674) | info on Rv2490c/PE_PGRS43 |
| Rv0623/vapB30 | (cc=0.5617) | info on Rv0623/vapB30 |
| Rv0359/- | (cc=0.544) | info on Rv0359/- |
| Rv2340c/PE_PGRS39 | (cc=0.5391) | info on Rv2340c/PE_PGRS39 |
| Rv1032c/trcS | (cc=0.5366) | info on Rv1032c/trcS |
| Rv1765c/- | (cc=0.5314) | info on Rv1765c/- |
Correlation of Rv1089/PE10 with Rv2015c/-
Normalized LFCs for Rv1089/PE10:
(description and provenance of datasets)
| Rv1089/PE10 | Rv2015c/- | |
| Fe_supp_jason_reseq | 2.729 | 0.18 |
| low_pH_jason_reseq | -1.549 | -0.142 |
| NO_jason_reseq | 1.467 | -0.486 |
| B6_jason_reseq | 1.672 | 0.448 |
| MHCII_jason_reseq | 2.369 | 0.237 |
| Isoniazid02 | 0.53 | 0.218 |
| Rifampicin4 | 1.633 | 0.777 |
| Ethambutol3 | 3.017 | 0.717 |
| Meropenem3 | 1.224 | 0.328 |
| Vancomycin16 | 0.727 | 0.021 |
| Rv2680_day32 | -0.131 | -0.264 |
| H37Rv_KO_MarP | 1.531 | -0.385 |
| hypoxia_3wks | -0.407 | -0.235 |
| hypoxia_6wks | -1.585 | -0.697 |
| glycerol | 2.092 | -0.278 |
| cholesterol | -0.197 | -0.516 |
| AJ | 1.782 | 0.598 |
| Bibs02 | 1.062 | 0.742 |
| Bibs02c | 0.433 | 0.579 |
| BL6 | -2.751 | -1.128 |
| BL6a | -0.682 | -0.423 |
| BXD01 | -1.73 | -0.68 |
| BXD010 | -1.438 | -0.026 |
| BXD011 | -0.659 | -0.594 |
| BXD03 | -1.087 | -0.133 |
| BXD04 | -0.864 | -0.177 |
| BXD05 | 0.236 | -0.577 |
| BXD06 | -1.403 | -0.834 |
| BXD07 | -2.116 | -1.08 |
| BXD08 | -1.596 | -0.957 |
| BXD09 | -1.091 | -0.406 |
| CAST | 0.617 | 0.389 |
| CCcont | -1.854 | -0.744 |
| DS01 | -0.498 | -0.024 |
| DS02 | -1.218 | -0.203 |
| DS04 | 0.614 | 0.048 |
| DS0c | 0.938 | 0.456 |
| GP01 | 1.922 | 0.632 |
| GP02 | 0.613 | 0.362 |
| GP0c | 2.39 | 0.536 |
| NOD | -1.57 | 0.472 |
| NZO | 1.445 | 0.705 |
| PWK | 0.19 | 1.238 |
| H37Rv_KO_CtpC | -0.268 | -0.074 |
| H37Rv_KO_CtpD | 0.315 | 0.704 |
| H37Rv_KO_Rv1272 | -2.007 | -0.124 |
| H37Rv_KO_SugABC | -1.076 | -0.763 |
| H37Rv_KO_MbtN | -0.43 | 0.258 |
| Trans05 | -0.236 | 0.088 |
| macrophage_unactivated | -1.424 | -1.228 |
| IL1 | -0.676 | -0.136 |
| Rapamycin | -2.756 | -0.678 |
| Tcell | -2.326 | -0.551 |
| GMCSF | -3.137 | 0.0 |
| IFNab | -0.447 | -0.998 |
| IFNg | -0.294 | -0.77 |
| IFNg_GMCSF1 | -2.064 | -0.072 |
| Rv1432_day32 | 0.0 | 0.173 |
| Rv1565c_day32 | 0.0 | 0.185 |
| secA2_input | 1.315 | 0.604 |
| delta_Rv3594 | -0.45 | -0.04 |
| delta_Rv3717 | -0.37 | 0.394 |
| delta_Rv3811 | 0.033 | 0.274 |
| delta_Rv0954 | -0.527 | 0.022 |
| PonA1 | -2.233 | -0.155 |
| EccD1_KO | 1.924 | 0.691 |
| EspI_KO | 0.0 | -0.083 |
| PE35_KO | 3.652 | 0.729 |
| PPE68_KO | 2.62 | 0.672 |
| glycerol2 | 0.27 | -0.304 |
| lignocerate | 0.684 | 0.093 |
| oleate | -1.323 | -0.147 |
| phosphatidylcholine | 0.183 | 0.046 |
| acetate | 0.321 | 0.196 |
| glucAc | -0.405 | 0.164 |
| Rv0950ko | 1.155 | -0.449 |
| Rv1096ko | -0.293 | 0.0 |
| Rv3684ko | 1.333 | -0.753 |
| delta_otsA_trehalose | -1.776 | 0.418 |