Top 10 genes with highest correlation to Rv1035c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0150c/- | (cc=0.5665) | info on Rv0150c/- |
| Rv2585c/- | (cc=0.5171) | info on Rv2585c/- |
| Rv1767/- | (cc=0.5114) | info on Rv1767/- |
| Rv1897c/- | (cc=0.4643) | info on Rv1897c/- |
| Rv1363c/- | (cc=0.4458) | info on Rv1363c/- |
| Rv2549c/vapC20 | (cc=0.4271) | info on Rv2549c/vapC20 |
| Rv1486c/- | (cc=0.422) | info on Rv1486c/- |
| Rv2806/- | (cc=0.4212) | info on Rv2806/- |
| Rv2231c/cobC | (cc=0.4195) | info on Rv2231c/cobC |
| Rv2129c/- | (cc=0.419) | info on Rv2129c/- |
Correlation of Rv1035c/- with Rv2549c/vapC20
Normalized LFCs for Rv1035c/-:
(description and provenance of datasets)
| Rv1035c/- | Rv2549c/vapC20 | |
| Fe_supp_jason_reseq | 0.264 | 0.611 |
| low_pH_jason_reseq | -1.723 | 0.017 |
| NO_jason_reseq | -0.239 | 0.026 |
| B6_jason_reseq | -0.285 | 0.279 |
| MHCII_jason_reseq | -0.151 | 0.577 |
| Isoniazid02 | -1.037 | -0.451 |
| Rifampicin4 | 0.227 | 0.699 |
| Ethambutol3 | -0.755 | -0.247 |
| Meropenem3 | 2.125 | -0.238 |
| Vancomycin16 | -0.488 | 0.186 |
| Rv2680_day32 | 1.306 | 1.401 |
| H37Rv_KO_MarP | -0.906 | 0.356 |
| hypoxia_3wks | -0.227 | -0.323 |
| hypoxia_6wks | -0.558 | 0.608 |
| glycerol | 0.208 | 0.041 |
| cholesterol | 1.439 | -0.042 |
| AJ | 1.321 | -0.387 |
| Bibs02 | 2.307 | 0.6 |
| Bibs02c | -2.12 | -0.724 |
| BL6 | -1.392 | -1.04 |
| BL6a | 0.91 | -0.422 |
| BXD01 | 0.331 | -0.632 |
| BXD010 | 1.179 | 0.148 |
| BXD011 | 0.045 | 0.148 |
| BXD03 | 1.519 | 0.085 |
| BXD04 | -0.299 | -0.437 |
| BXD05 | 2.665 | -0.2 |
| BXD06 | 0.483 | -0.409 |
| BXD07 | 1.003 | -0.21 |
| BXD08 | 0.811 | -0.422 |
| BXD09 | 0.318 | -0.004 |
| CAST | 1.54 | -0.491 |
| CCcont | -1.662 | -1.321 |
| DS01 | -1.177 | -0.106 |
| DS02 | 0.841 | 0.432 |
| DS04 | 0.936 | 0.398 |
| DS0c | -1.211 | 0.272 |
| GP01 | -0.383 | -1.116 |
| GP02 | 2.29 | 0.526 |
| GP0c | 0.134 | -0.349 |
| NOD | 0.231 | 0.103 |
| NZO | 0.722 | -0.01 |
| PWK | 0.136 | -0.01 |
| H37Rv_KO_CtpC | -0.186 | 0.134 |
| H37Rv_KO_CtpD | -1.409 | 0.254 |
| H37Rv_KO_Rv1272 | 1.477 | 0.372 |
| H37Rv_KO_SugABC | -0.754 | -0.156 |
| H37Rv_KO_MbtN | 0.608 | 1.087 |
| Trans05 | 2.581 | 0.03 |
| macrophage_unactivated | 1.764 | -0.713 |
| IL1 | 0.359 | -0.605 |
| Rapamycin | 1.715 | -0.239 |
| Tcell | 0.163 | -0.352 |
| GMCSF | 3.369 | 0.277 |
| IFNab | 0.834 | 0.112 |
| IFNg | 0.198 | -0.115 |
| IFNg_GMCSF1 | 2.02 | 0.33 |
| Rv1432_day32 | 0.0 | 0.282 |
| Rv1565c_day32 | -0.082 | 0.1 |
| secA2_input | -1.832 | -1.126 |
| delta_Rv3594 | 1.825 | 0.6 |
| delta_Rv3717 | 2.901 | 0.988 |
| delta_Rv3811 | 3.004 | 0.958 |
| delta_Rv0954 | 1.919 | 0.05 |
| PonA1 | -2.086 | -0.772 |
| EccD1_KO | -0.96 | -1.467 |
| EspI_KO | -0.833 | -0.559 |
| PE35_KO | -0.181 | -0.992 |
| PPE68_KO | -1.808 | -1.952 |
| glycerol2 | -1.115 | -0.363 |
| lignocerate | -1.801 | -0.14 |
| oleate | -0.474 | -0.512 |
| phosphatidylcholine | -1.039 | -0.186 |
| acetate | -3.125 | -0.113 |
| glucAc | -3.31 | -0.727 |
| Rv0950ko | 0.211 | 0.495 |
| Rv1096ko | 1.306 | 0.796 |
| Rv3684ko | 0.861 | -0.796 |
| delta_otsA_trehalose | -0.77 | 1.234 |