Top 10 genes with highest correlation to Rv1035c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0150c/- | (cc=0.5665) | info on Rv0150c/- |
| Rv2585c/- | (cc=0.5171) | info on Rv2585c/- |
| Rv1767/- | (cc=0.5114) | info on Rv1767/- |
| Rv1897c/- | (cc=0.4643) | info on Rv1897c/- |
| Rv1363c/- | (cc=0.4458) | info on Rv1363c/- |
| Rv2549c/vapC20 | (cc=0.4271) | info on Rv2549c/vapC20 |
| Rv1486c/- | (cc=0.422) | info on Rv1486c/- |
| Rv2806/- | (cc=0.4212) | info on Rv2806/- |
| Rv2231c/cobC | (cc=0.4195) | info on Rv2231c/cobC |
| Rv2129c/- | (cc=0.419) | info on Rv2129c/- |
Correlation of Rv1035c/- with Rv2129c/-
Normalized LFCs for Rv1035c/-:
(description and provenance of datasets)
| Rv1035c/- | Rv2129c/- | |
| Fe_supp_jason_reseq | 0.264 | 0.497 |
| low_pH_jason_reseq | -1.723 | 0.146 |
| NO_jason_reseq | -0.239 | -0.244 |
| B6_jason_reseq | -0.285 | -0.487 |
| MHCII_jason_reseq | -0.151 | -0.909 |
| Isoniazid02 | -1.037 | -0.275 |
| Rifampicin4 | 0.227 | 0.301 |
| Ethambutol3 | -0.755 | 0.261 |
| Meropenem3 | 2.125 | -0.302 |
| Vancomycin16 | -0.488 | 0.353 |
| Rv2680_day32 | 1.306 | -1.274 |
| H37Rv_KO_MarP | -0.906 | -0.158 |
| hypoxia_3wks | -0.227 | 0.132 |
| hypoxia_6wks | -0.558 | -0.088 |
| glycerol | 0.208 | -0.424 |
| cholesterol | 1.439 | -0.445 |
| AJ | 1.321 | -0.113 |
| Bibs02 | 2.307 | -0.301 |
| Bibs02c | -2.12 | -1.02 |
| BL6 | -1.392 | -1.14 |
| BL6a | 0.91 | -0.019 |
| BXD01 | 0.331 | 0.107 |
| BXD010 | 1.179 | 0.884 |
| BXD011 | 0.045 | 0.999 |
| BXD03 | 1.519 | 0.88 |
| BXD04 | -0.299 | 0.124 |
| BXD05 | 2.665 | 0.298 |
| BXD06 | 0.483 | 0.702 |
| BXD07 | 1.003 | 0.543 |
| BXD08 | 0.811 | 0.45 |
| BXD09 | 0.318 | 0.586 |
| CAST | 1.54 | -0.889 |
| CCcont | -1.662 | -0.895 |
| DS01 | -1.177 | -0.756 |
| DS02 | 0.841 | -1.093 |
| DS04 | 0.936 | -0.018 |
| DS0c | -1.211 | -0.96 |
| GP01 | -0.383 | -0.481 |
| GP02 | 2.29 | -1.021 |
| GP0c | 0.134 | -0.012 |
| NOD | 0.231 | -1.095 |
| NZO | 0.722 | -0.562 |
| PWK | 0.136 | -1.016 |
| H37Rv_KO_CtpC | -0.186 | 0.883 |
| H37Rv_KO_CtpD | -1.409 | 1.139 |
| H37Rv_KO_Rv1272 | 1.477 | 0.798 |
| H37Rv_KO_SugABC | -0.754 | 1.128 |
| H37Rv_KO_MbtN | 0.608 | 1.637 |
| Trans05 | 2.581 | 0.174 |
| macrophage_unactivated | 1.764 | 0.215 |
| IL1 | 0.359 | 0.727 |
| Rapamycin | 1.715 | 0.236 |
| Tcell | 0.163 | -0.13 |
| GMCSF | 3.369 | 0.755 |
| IFNab | 0.834 | 0.399 |
| IFNg | 0.198 | -0.216 |
| IFNg_GMCSF1 | 2.02 | -0.126 |
| Rv1432_day32 | 0.0 | 0.263 |
| Rv1565c_day32 | -0.082 | -0.22 |
| secA2_input | -1.832 | -0.578 |
| delta_Rv3594 | 1.825 | 0.505 |
| delta_Rv3717 | 2.901 | 0.385 |
| delta_Rv3811 | 3.004 | -0.089 |
| delta_Rv0954 | 1.919 | 0.354 |
| PonA1 | -2.086 | 0.0 |
| EccD1_KO | -0.96 | -1.677 |
| EspI_KO | -0.833 | -1.064 |
| PE35_KO | -0.181 | -0.989 |
| PPE68_KO | -1.808 | -1.085 |
| glycerol2 | -1.115 | -0.276 |
| lignocerate | -1.801 | -1.167 |
| oleate | -0.474 | 0.116 |
| phosphatidylcholine | -1.039 | -0.381 |
| acetate | -3.125 | -1.99 |
| glucAc | -3.31 | -2.429 |
| Rv0950ko | 0.211 | 0.467 |
| Rv1096ko | 1.306 | 0.389 |
| Rv3684ko | 0.861 | -0.033 |
| delta_otsA_trehalose | -0.77 | 0.013 |