Top 10 genes with highest correlation to Rv1019/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2224c/caeA | (cc=0.5354) | info on Rv2224c/caeA |
| Rv0806c/cpsY | (cc=0.5198) | info on Rv0806c/cpsY |
| Rv2609c/- | (cc=0.5143) | info on Rv2609c/- |
| Rv3868/eccA1 | (cc=0.5078) | info on Rv3868/eccA1 |
| Rv2404c/lepA | (cc=0.5022) | info on Rv2404c/lepA |
| Rv2366c/- | (cc=0.4929) | info on Rv2366c/- |
| Rv1829/- | (cc=0.4863) | info on Rv1829/- |
| Rv0056/rplI | (cc=0.4819) | info on Rv0056/rplI |
| Rv1109c/- | (cc=0.4776) | info on Rv1109c/- |
| Rv0353/hspR | (cc=0.4747) | info on Rv0353/hspR |
Correlation of Rv1019/- with Rv2404c/lepA
Normalized LFCs for Rv1019/-:
(description and provenance of datasets)
| Rv1019/- | Rv2404c/lepA | |
| Fe_supp_jason_reseq | 1.047 | 0.598 |
| low_pH_jason_reseq | -0.607 | -1.467 |
| NO_jason_reseq | -2.042 | 2.108 |
| B6_jason_reseq | -0.973 | 0.881 |
| MHCII_jason_reseq | -0.276 | -0.098 |
| Isoniazid02 | 0.106 | 5.905 |
| Rifampicin4 | -0.847 | 1.597 |
| Ethambutol3 | -0.106 | 1.79 |
| Meropenem3 | -2.205 | 0.264 |
| Vancomycin16 | -1.769 | 0.846 |
| Rv2680_day32 | 0.349 | -0.613 |
| H37Rv_KO_MarP | 1.136 | 1.555 |
| hypoxia_3wks | -2.416 | -3.274 |
| hypoxia_6wks | -2.203 | -3.802 |
| glycerol | -0.281 | 1.044 |
| cholesterol | -0.061 | -0.171 |
| AJ | -2.086 | -0.41 |
| Bibs02 | -0.342 | -1.46 |
| Bibs02c | -0.599 | -0.94 |
| BL6 | -0.764 | -1.237 |
| BL6a | -0.603 | 0.098 |
| BXD01 | -0.804 | -1.128 |
| BXD010 | -0.512 | 0.312 |
| BXD011 | 0.018 | 0.269 |
| BXD03 | -1.507 | 0.192 |
| BXD04 | -1.217 | -0.987 |
| BXD05 | -0.805 | 0.654 |
| BXD06 | 0.049 | 1.065 |
| BXD07 | -0.329 | 0.068 |
| BXD08 | -1.24 | 0.04 |
| BXD09 | 0.72 | -0.265 |
| CAST | -4.123 | -1.146 |
| CCcont | -0.635 | 0.0 |
| DS01 | -1.785 | -1.461 |
| DS02 | -2.317 | -2.658 |
| DS04 | -0.469 | -0.698 |
| DS0c | -1.351 | -1.422 |
| GP01 | 0.371 | -0.384 |
| GP02 | -0.611 | -0.867 |
| GP0c | -0.186 | -0.506 |
| NOD | -1.038 | -0.023 |
| NZO | -1.397 | -0.928 |
| PWK | -3.923 | -1.324 |
| H37Rv_KO_CtpC | -2.272 | -1.832 |
| H37Rv_KO_CtpD | -0.806 | -0.957 |
| H37Rv_KO_Rv1272 | -1.571 | -0.3 |
| H37Rv_KO_SugABC | -0.821 | -0.073 |
| H37Rv_KO_MbtN | 0.835 | 0.832 |
| Trans05 | 0.188 | -1.161 |
| macrophage_unactivated | 0.281 | 0.451 |
| IL1 | 1.299 | 0.249 |
| Rapamycin | 1.851 | 0.319 |
| Tcell | -0.016 | 0.068 |
| GMCSF | -0.451 | 0.816 |
| IFNab | -0.535 | -0.408 |
| IFNg | 0.142 | 0.224 |
| IFNg_GMCSF1 | -0.792 | 0.327 |
| Rv1432_day32 | -2.066 | 0.824 |
| Rv1565c_day32 | -1.287 | -2.443 |
| secA2_input | 0.676 | -0.542 |
| delta_Rv3594 | 0.329 | 3.552 |
| delta_Rv3717 | 2.416 | 4.823 |
| delta_Rv3811 | 0.932 | 2.528 |
| delta_Rv0954 | 0.787 | 3.693 |
| PonA1 | -0.196 | 0.0 |
| EccD1_KO | -0.316 | 0.056 |
| EspI_KO | 0.277 | 0.816 |
| PE35_KO | -1.149 | 0.298 |
| PPE68_KO | 0.0 | 0.915 |
| glycerol2 | 1.83 | -0.094 |
| lignocerate | -2.468 | -1.316 |
| oleate | -2.874 | -0.703 |
| phosphatidylcholine | -2.182 | -1.192 |
| acetate | 0.598 | -0.111 |
| glucAc | -0.117 | -0.084 |
| Rv0950ko | 0.452 | 0.651 |
| Rv1096ko | 0.495 | -0.19 |
| Rv3684ko | 0.727 | 1.002 |
| delta_otsA_trehalose | -0.715 | -0.866 |