Top 10 genes with highest correlation to Rv1019/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2224c/caeA | (cc=0.5354) | info on Rv2224c/caeA |
| Rv0806c/cpsY | (cc=0.5198) | info on Rv0806c/cpsY |
| Rv2609c/- | (cc=0.5143) | info on Rv2609c/- |
| Rv3868/eccA1 | (cc=0.5078) | info on Rv3868/eccA1 |
| Rv2404c/lepA | (cc=0.5022) | info on Rv2404c/lepA |
| Rv2366c/- | (cc=0.4929) | info on Rv2366c/- |
| Rv1829/- | (cc=0.4863) | info on Rv1829/- |
| Rv0056/rplI | (cc=0.4819) | info on Rv0056/rplI |
| Rv1109c/- | (cc=0.4776) | info on Rv1109c/- |
| Rv0353/hspR | (cc=0.4747) | info on Rv0353/hspR |
Correlation of Rv1019/- with Rv2366c/-
Normalized LFCs for Rv1019/-:
(description and provenance of datasets)
| Rv1019/- | Rv2366c/- | |
| Fe_supp_jason_reseq | 1.047 | 0.207 |
| low_pH_jason_reseq | -0.607 | -0.979 |
| NO_jason_reseq | -2.042 | -1.672 |
| B6_jason_reseq | -0.973 | -0.538 |
| MHCII_jason_reseq | -0.276 | 0.26 |
| Isoniazid02 | 0.106 | -0.159 |
| Rifampicin4 | -0.847 | 0.417 |
| Ethambutol3 | -0.106 | 0.251 |
| Meropenem3 | -2.205 | 0.34 |
| Vancomycin16 | -1.769 | 0.297 |
| Rv2680_day32 | 0.349 | 0.227 |
| H37Rv_KO_MarP | 1.136 | 0.986 |
| hypoxia_3wks | -2.416 | 0.299 |
| hypoxia_6wks | -2.203 | 0.0 |
| glycerol | -0.281 | 0.246 |
| cholesterol | -0.061 | -0.047 |
| AJ | -2.086 | -0.35 |
| Bibs02 | -0.342 | 0.0 |
| Bibs02c | -0.599 | 0.255 |
| BL6 | -0.764 | 0.393 |
| BL6a | -0.603 | 0.406 |
| BXD01 | -0.804 | -0.797 |
| BXD010 | -0.512 | -0.014 |
| BXD011 | 0.018 | -0.257 |
| BXD03 | -1.507 | -0.679 |
| BXD04 | -1.217 | 0.286 |
| BXD05 | -0.805 | 0.575 |
| BXD06 | 0.049 | -0.359 |
| BXD07 | -0.329 | 0.196 |
| BXD08 | -1.24 | -0.119 |
| BXD09 | 0.72 | -0.143 |
| CAST | -4.123 | -0.127 |
| CCcont | -0.635 | 0.306 |
| DS01 | -1.785 | -1.027 |
| DS02 | -2.317 | -1.85 |
| DS04 | -0.469 | 0.18 |
| DS0c | -1.351 | 0.201 |
| GP01 | 0.371 | 0.0 |
| GP02 | -0.611 | 0.009 |
| GP0c | -0.186 | 0.527 |
| NOD | -1.038 | 0.519 |
| NZO | -1.397 | 0.0 |
| PWK | -3.923 | 0.021 |
| H37Rv_KO_CtpC | -2.272 | 0.052 |
| H37Rv_KO_CtpD | -0.806 | 0.514 |
| H37Rv_KO_Rv1272 | -1.571 | -0.34 |
| H37Rv_KO_SugABC | -0.821 | -0.645 |
| H37Rv_KO_MbtN | 0.835 | 0.611 |
| Trans05 | 0.188 | 0.325 |
| macrophage_unactivated | 0.281 | -0.496 |
| IL1 | 1.299 | 0.421 |
| Rapamycin | 1.851 | 0.675 |
| Tcell | -0.016 | -0.098 |
| GMCSF | -0.451 | 0.267 |
| IFNab | -0.535 | 0.221 |
| IFNg | 0.142 | 0.449 |
| IFNg_GMCSF1 | -0.792 | 0.0 |
| Rv1432_day32 | -2.066 | -0.884 |
| Rv1565c_day32 | -1.287 | -1.055 |
| secA2_input | 0.676 | 0.717 |
| delta_Rv3594 | 0.329 | 1.715 |
| delta_Rv3717 | 2.416 | 0.965 |
| delta_Rv3811 | 0.932 | 0.882 |
| delta_Rv0954 | 0.787 | 1.877 |
| PonA1 | -0.196 | -0.286 |
| EccD1_KO | -0.316 | 0.671 |
| EspI_KO | 0.277 | 0.471 |
| PE35_KO | -1.149 | 0.405 |
| PPE68_KO | 0.0 | 0.093 |
| glycerol2 | 1.83 | -0.165 |
| lignocerate | -2.468 | -2.908 |
| oleate | -2.874 | -0.74 |
| phosphatidylcholine | -2.182 | -1.333 |
| acetate | 0.598 | 0.419 |
| glucAc | -0.117 | 0.174 |
| Rv0950ko | 0.452 | 0.042 |
| Rv1096ko | 0.495 | -0.256 |
| Rv3684ko | 0.727 | -0.092 |
| delta_otsA_trehalose | -0.715 | -0.095 |