Top 10 genes with highest correlation to Rv1019/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2224c/caeA | (cc=0.5354) | info on Rv2224c/caeA |
| Rv0806c/cpsY | (cc=0.5198) | info on Rv0806c/cpsY |
| Rv2609c/- | (cc=0.5143) | info on Rv2609c/- |
| Rv3868/eccA1 | (cc=0.5078) | info on Rv3868/eccA1 |
| Rv2404c/lepA | (cc=0.5022) | info on Rv2404c/lepA |
| Rv2366c/- | (cc=0.4929) | info on Rv2366c/- |
| Rv1829/- | (cc=0.4863) | info on Rv1829/- |
| Rv0056/rplI | (cc=0.4819) | info on Rv0056/rplI |
| Rv1109c/- | (cc=0.4776) | info on Rv1109c/- |
| Rv0353/hspR | (cc=0.4747) | info on Rv0353/hspR |
Correlation of Rv1019/- with Rv1109c/-
Normalized LFCs for Rv1019/-:
(description and provenance of datasets)
| Rv1019/- | Rv1109c/- | |
| Fe_supp_jason_reseq | 1.047 | 0.666 |
| low_pH_jason_reseq | -0.607 | -0.069 |
| NO_jason_reseq | -2.042 | -0.837 |
| B6_jason_reseq | -0.973 | -1.372 |
| MHCII_jason_reseq | -0.276 | -0.925 |
| Isoniazid02 | 0.106 | 0.837 |
| Rifampicin4 | -0.847 | -0.636 |
| Ethambutol3 | -0.106 | 0.952 |
| Meropenem3 | -2.205 | 0.329 |
| Vancomycin16 | -1.769 | -0.576 |
| Rv2680_day32 | 0.349 | -0.461 |
| H37Rv_KO_MarP | 1.136 | -0.742 |
| hypoxia_3wks | -2.416 | 0.195 |
| hypoxia_6wks | -2.203 | 0.136 |
| glycerol | -0.281 | 0.983 |
| cholesterol | -0.061 | 0.101 |
| AJ | -2.086 | -2.681 |
| Bibs02 | -0.342 | -1.534 |
| Bibs02c | -0.599 | 0.681 |
| BL6 | -0.764 | 0.261 |
| BL6a | -0.603 | 0.676 |
| BXD01 | -0.804 | 0.339 |
| BXD010 | -0.512 | -0.31 |
| BXD011 | 0.018 | 1.074 |
| BXD03 | -1.507 | -0.722 |
| BXD04 | -1.217 | 0.409 |
| BXD05 | -0.805 | -0.671 |
| BXD06 | 0.049 | -0.229 |
| BXD07 | -0.329 | 0.272 |
| BXD08 | -1.24 | -0.029 |
| BXD09 | 0.72 | 0.189 |
| CAST | -4.123 | -2.611 |
| CCcont | -0.635 | 0.517 |
| DS01 | -1.785 | -0.347 |
| DS02 | -2.317 | 0.334 |
| DS04 | -0.469 | -1.448 |
| DS0c | -1.351 | -1.106 |
| GP01 | 0.371 | -0.426 |
| GP02 | -0.611 | -0.711 |
| GP0c | -0.186 | -0.268 |
| NOD | -1.038 | -2.319 |
| NZO | -1.397 | -1.946 |
| PWK | -3.923 | -2.693 |
| H37Rv_KO_CtpC | -2.272 | 0.091 |
| H37Rv_KO_CtpD | -0.806 | 1.105 |
| H37Rv_KO_Rv1272 | -1.571 | -0.608 |
| H37Rv_KO_SugABC | -0.821 | 0.393 |
| H37Rv_KO_MbtN | 0.835 | 0.285 |
| Trans05 | 0.188 | -0.353 |
| macrophage_unactivated | 0.281 | 1.25 |
| IL1 | 1.299 | 1.258 |
| Rapamycin | 1.851 | 0.506 |
| Tcell | -0.016 | 0.668 |
| GMCSF | -0.451 | 0.177 |
| IFNab | -0.535 | 0.599 |
| IFNg | 0.142 | 0.369 |
| IFNg_GMCSF1 | -0.792 | -0.559 |
| Rv1432_day32 | -2.066 | -2.095 |
| Rv1565c_day32 | -1.287 | -2.199 |
| secA2_input | 0.676 | 1.035 |
| delta_Rv3594 | 0.329 | 1.361 |
| delta_Rv3717 | 2.416 | 0.148 |
| delta_Rv3811 | 0.932 | 0.271 |
| delta_Rv0954 | 0.787 | 1.585 |
| PonA1 | -0.196 | 1.165 |
| EccD1_KO | -0.316 | 1.276 |
| EspI_KO | 0.277 | 0.234 |
| PE35_KO | -1.149 | 0.335 |
| PPE68_KO | 0.0 | 1.241 |
| glycerol2 | 1.83 | 0.154 |
| lignocerate | -2.468 | 0.024 |
| oleate | -2.874 | -0.295 |
| phosphatidylcholine | -2.182 | 0.567 |
| acetate | 0.598 | -0.263 |
| glucAc | -0.117 | -0.264 |
| Rv0950ko | 0.452 | 0.645 |
| Rv1096ko | 0.495 | 0.799 |
| Rv3684ko | 0.727 | -0.236 |
| delta_otsA_trehalose | -0.715 | 1.439 |