Top 10 genes with highest correlation to Rv1019/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2224c/caeA | (cc=0.5354) | info on Rv2224c/caeA |
| Rv0806c/cpsY | (cc=0.5198) | info on Rv0806c/cpsY |
| Rv2609c/- | (cc=0.5143) | info on Rv2609c/- |
| Rv3868/eccA1 | (cc=0.5078) | info on Rv3868/eccA1 |
| Rv2404c/lepA | (cc=0.5022) | info on Rv2404c/lepA |
| Rv2366c/- | (cc=0.4929) | info on Rv2366c/- |
| Rv1829/- | (cc=0.4863) | info on Rv1829/- |
| Rv0056/rplI | (cc=0.4819) | info on Rv0056/rplI |
| Rv1109c/- | (cc=0.4776) | info on Rv1109c/- |
| Rv0353/hspR | (cc=0.4747) | info on Rv0353/hspR |
Correlation of Rv1019/- with Rv0353/hspR
Normalized LFCs for Rv1019/-:
(description and provenance of datasets)
| Rv1019/- | Rv0353/hspR | |
| Fe_supp_jason_reseq | 1.047 | 1.081 |
| low_pH_jason_reseq | -0.607 | 0.395 |
| NO_jason_reseq | -2.042 | -2.998 |
| B6_jason_reseq | -0.973 | -2.146 |
| MHCII_jason_reseq | -0.276 | -3.028 |
| Isoniazid02 | 0.106 | -3.178 |
| Rifampicin4 | -0.847 | -0.829 |
| Ethambutol3 | -0.106 | -0.204 |
| Meropenem3 | -2.205 | -1.399 |
| Vancomycin16 | -1.769 | -1.937 |
| Rv2680_day32 | 0.349 | 0.642 |
| H37Rv_KO_MarP | 1.136 | -3.539 |
| hypoxia_3wks | -2.416 | -0.853 |
| hypoxia_6wks | -2.203 | 0.775 |
| glycerol | -0.281 | 0.234 |
| cholesterol | -0.061 | -1.489 |
| AJ | -2.086 | -5.296 |
| Bibs02 | -0.342 | -1.468 |
| Bibs02c | -0.599 | -1.4 |
| BL6 | -0.764 | -2.378 |
| BL6a | -0.603 | -2.165 |
| BXD01 | -0.804 | -1.113 |
| BXD010 | -0.512 | -1.644 |
| BXD011 | 0.018 | -1.833 |
| BXD03 | -1.507 | -0.98 |
| BXD04 | -1.217 | -2.823 |
| BXD05 | -0.805 | -1.913 |
| BXD06 | 0.049 | -2.356 |
| BXD07 | -0.329 | -2.409 |
| BXD08 | -1.24 | -2.829 |
| BXD09 | 0.72 | -2.844 |
| CAST | -4.123 | -5.564 |
| CCcont | -0.635 | 0.629 |
| DS01 | -1.785 | -6.0 |
| DS02 | -2.317 | -4.874 |
| DS04 | -0.469 | -4.51 |
| DS0c | -1.351 | -4.777 |
| GP01 | 0.371 | -2.928 |
| GP02 | -0.611 | -2.403 |
| GP0c | -0.186 | -2.053 |
| NOD | -1.038 | -3.965 |
| NZO | -1.397 | -5.916 |
| PWK | -3.923 | -5.391 |
| H37Rv_KO_CtpC | -2.272 | -0.238 |
| H37Rv_KO_CtpD | -0.806 | -2.606 |
| H37Rv_KO_Rv1272 | -1.571 | -3.407 |
| H37Rv_KO_SugABC | -0.821 | -1.942 |
| H37Rv_KO_MbtN | 0.835 | -0.756 |
| Trans05 | 0.188 | -2.274 |
| macrophage_unactivated | 0.281 | -1.865 |
| IL1 | 1.299 | 1.213 |
| Rapamycin | 1.851 | 0.19 |
| Tcell | -0.016 | 0.264 |
| GMCSF | -0.451 | -1.663 |
| IFNab | -0.535 | -1.215 |
| IFNg | 0.142 | -0.452 |
| IFNg_GMCSF1 | -0.792 | -2.507 |
| Rv1432_day32 | -2.066 | -2.312 |
| Rv1565c_day32 | -1.287 | -0.415 |
| secA2_input | 0.676 | 1.991 |
| delta_Rv3594 | 0.329 | 0.125 |
| delta_Rv3717 | 2.416 | 1.212 |
| delta_Rv3811 | 0.932 | -0.147 |
| delta_Rv0954 | 0.787 | 0.567 |
| PonA1 | -0.196 | -1.895 |
| EccD1_KO | -0.316 | -0.753 |
| EspI_KO | 0.277 | -0.653 |
| PE35_KO | -1.149 | -1.21 |
| PPE68_KO | 0.0 | -1.049 |
| glycerol2 | 1.83 | -5.507 |
| lignocerate | -2.468 | -1.453 |
| oleate | -2.874 | -5.475 |
| phosphatidylcholine | -2.182 | -0.436 |
| acetate | 0.598 | 0.785 |
| glucAc | -0.117 | 0.882 |
| Rv0950ko | 0.452 | 0.669 |
| Rv1096ko | 0.495 | -1.399 |
| Rv3684ko | 0.727 | 0.763 |
| delta_otsA_trehalose | -0.715 | -1.134 |