Top 10 genes with highest correlation to Rv1019/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2224c/caeA | (cc=0.5354) | info on Rv2224c/caeA |
Rv0806c/cpsY | (cc=0.5198) | info on Rv0806c/cpsY |
Rv2609c/- | (cc=0.5143) | info on Rv2609c/- |
Rv3868/eccA1 | (cc=0.5078) | info on Rv3868/eccA1 |
Rv2404c/lepA | (cc=0.5022) | info on Rv2404c/lepA |
Rv2366c/- | (cc=0.4929) | info on Rv2366c/- |
Rv1829/- | (cc=0.4863) | info on Rv1829/- |
Rv0056/rplI | (cc=0.4819) | info on Rv0056/rplI |
Rv1109c/- | (cc=0.4776) | info on Rv1109c/- |
Rv0353/hspR | (cc=0.4747) | info on Rv0353/hspR |
Correlation of Rv1019/- with Rv2224c/caeA
Normalized LFCs for Rv1019/-:
(description and provenance of datasets)
Rv1019/- | Rv2224c/caeA | |
Fe_supp_jason_reseq | 1.047 | 2.788 |
low_pH_jason_reseq | -0.607 | 0.545 |
NO_jason_reseq | -2.042 | -3.87 |
B6_jason_reseq | -0.973 | -1.175 |
MHCII_jason_reseq | -0.276 | -0.49 |
Isoniazid02 | 0.106 | -0.081 |
Rifampicin4 | -0.847 | -6.0 |
Ethambutol3 | -0.106 | -3.633 |
Meropenem3 | -2.205 | -4.666 |
Vancomycin16 | -1.769 | -6.0 |
Rv2680_day32 | 0.349 | -2.43 |
H37Rv_KO_MarP | 1.136 | -4.312 |
hypoxia_3wks | -2.416 | -3.465 |
hypoxia_6wks | -2.203 | -2.907 |
glycerol | -0.281 | 1.659 |
cholesterol | -0.061 | 2.409 |
AJ | -2.086 | -3.629 |
Bibs02 | -0.342 | -2.044 |
Bibs02c | -0.599 | -2.537 |
BL6 | -0.764 | 0.28 |
BL6a | -0.603 | -1.53 |
BXD01 | -0.804 | -1.646 |
BXD010 | -0.512 | -0.061 |
BXD011 | 0.018 | -0.338 |
BXD03 | -1.507 | -1.393 |
BXD04 | -1.217 | -1.562 |
BXD05 | -0.805 | -0.357 |
BXD06 | 0.049 | -1.375 |
BXD07 | -0.329 | -0.94 |
BXD08 | -1.24 | -1.68 |
BXD09 | 0.72 | -0.553 |
CAST | -4.123 | -3.947 |
CCcont | -0.635 | 2.729 |
DS01 | -1.785 | -3.535 |
DS02 | -2.317 | -1.679 |
DS04 | -0.469 | -1.563 |
DS0c | -1.351 | -2.857 |
GP01 | 0.371 | -0.67 |
GP02 | -0.611 | -1.495 |
GP0c | -0.186 | 0.932 |
NOD | -1.038 | -2.958 |
NZO | -1.397 | -3.585 |
PWK | -3.923 | -3.704 |
H37Rv_KO_CtpC | -2.272 | 0.146 |
H37Rv_KO_CtpD | -0.806 | -0.557 |
H37Rv_KO_Rv1272 | -1.571 | 0.467 |
H37Rv_KO_SugABC | -0.821 | -0.587 |
H37Rv_KO_MbtN | 0.835 | 1.022 |
Trans05 | 0.188 | 0.292 |
macrophage_unactivated | 0.281 | -0.881 |
IL1 | 1.299 | 0.098 |
Rapamycin | 1.851 | -0.034 |
Tcell | -0.016 | -1.61 |
GMCSF | -0.451 | -1.648 |
IFNab | -0.535 | 1.575 |
IFNg | 0.142 | -1.24 |
IFNg_GMCSF1 | -0.792 | -1.653 |
Rv1432_day32 | -2.066 | -3.245 |
Rv1565c_day32 | -1.287 | -0.218 |
secA2_input | 0.676 | -0.266 |
delta_Rv3594 | 0.329 | 0.797 |
delta_Rv3717 | 2.416 | 0.213 |
delta_Rv3811 | 0.932 | 0.464 |
delta_Rv0954 | 0.787 | 0.72 |
PonA1 | -0.196 | -3.854 |
EccD1_KO | -0.316 | -0.013 |
EspI_KO | 0.277 | 0.04 |
PE35_KO | -1.149 | -1.948 |
PPE68_KO | 0.0 | -0.614 |
glycerol2 | 1.83 | -2.159 |
lignocerate | -2.468 | -2.67 |
oleate | -2.874 | -3.797 |
phosphatidylcholine | -2.182 | -3.751 |
acetate | 0.598 | 0.444 |
glucAc | -0.117 | 0.0 |
Rv0950ko | 0.452 | -1.019 |
Rv1096ko | 0.495 | 1.043 |
Rv3684ko | 0.727 | 1.097 |
delta_otsA_trehalose | -0.715 | 0.04 |