Top 10 genes with highest correlation to Rv0985c/mscL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3651/- | (cc=0.6364) | info on Rv3651/- |
| Rv3607c/folB | (cc=0.6142) | info on Rv3607c/folB |
| Rv2014/- | (cc=0.6021) | info on Rv2014/- |
| Rv3328c/sigJ | (cc=0.5879) | info on Rv3328c/sigJ |
| Rv1182/papA3 | (cc=0.5828) | info on Rv1182/papA3 |
| Rv0984/moaB2 | (cc=0.5721) | info on Rv0984/moaB2 |
| Rv2741/PE_PGRS47 | (cc=0.5712) | info on Rv2741/PE_PGRS47 |
| Rv0079/- | (cc=0.5603) | info on Rv0079/- |
| Rv1676/- | (cc=0.548) | info on Rv1676/- |
| Rv1646/PE17 | (cc=0.5406) | info on Rv1646/PE17 |
Correlation of Rv0985c/mscL with Rv3651/-
Normalized LFCs for Rv0985c/mscL:
(description and provenance of datasets)
| Rv0985c/mscL | Rv3651/- | |
| Fe_supp_jason_reseq | -0.2 | 0.923 |
| low_pH_jason_reseq | 0.597 | -0.979 |
| NO_jason_reseq | -0.593 | -2.625 |
| B6_jason_reseq | -0.109 | -0.496 |
| MHCII_jason_reseq | 0.374 | -0.503 |
| Isoniazid02 | 0.042 | -0.528 |
| Rifampicin4 | 0.563 | -1.584 |
| Ethambutol3 | 0.186 | -0.64 |
| Meropenem3 | 0.096 | 1.677 |
| Vancomycin16 | -0.151 | -0.828 |
| Rv2680_day32 | 0.223 | -0.883 |
| H37Rv_KO_MarP | 0.279 | 0.674 |
| hypoxia_3wks | -2.536 | -2.333 |
| hypoxia_6wks | -0.739 | -1.894 |
| glycerol | 0.889 | 2.73 |
| cholesterol | 0.508 | 1.434 |
| AJ | 0.553 | 0.918 |
| Bibs02 | 1.672 | 0.525 |
| Bibs02c | 1.34 | 1.682 |
| BL6 | -0.157 | -2.121 |
| BL6a | 0.188 | 0.63 |
| BXD01 | -0.865 | -1.751 |
| BXD010 | -0.396 | -2.715 |
| BXD011 | -0.69 | -2.35 |
| BXD03 | -1.197 | -1.959 |
| BXD04 | -1.516 | -2.187 |
| BXD05 | -1.172 | -2.282 |
| BXD06 | -0.951 | -2.463 |
| BXD07 | -0.184 | -2.348 |
| BXD08 | -1.049 | -1.202 |
| BXD09 | -0.853 | -2.036 |
| CAST | 1.306 | 0.297 |
| CCcont | 0.098 | -0.318 |
| DS01 | 1.357 | 2.156 |
| DS02 | 1.486 | 2.046 |
| DS04 | 0.537 | 1.941 |
| DS0c | 1.537 | 2.549 |
| GP01 | 0.059 | 0.873 |
| GP02 | 1.022 | -0.752 |
| GP0c | 0.946 | -0.255 |
| NOD | 1.695 | 1.206 |
| NZO | -0.038 | -0.172 |
| PWK | 0.22 | 0.18 |
| H37Rv_KO_CtpC | 0.245 | -0.459 |
| H37Rv_KO_CtpD | 0.106 | -0.358 |
| H37Rv_KO_Rv1272 | 0.604 | -2.989 |
| H37Rv_KO_SugABC | -1.654 | -1.491 |
| H37Rv_KO_MbtN | -0.046 | -1.493 |
| Trans05 | -0.483 | -2.769 |
| macrophage_unactivated | -0.821 | -0.35 |
| IL1 | -1.083 | -1.284 |
| Rapamycin | -0.988 | -2.047 |
| Tcell | -1.483 | -1.906 |
| GMCSF | -1.328 | -0.958 |
| IFNab | -1.521 | -1.533 |
| IFNg | -3.421 | -1.783 |
| IFNg_GMCSF1 | -0.691 | 0.0 |
| Rv1432_day32 | -0.052 | -0.632 |
| Rv1565c_day32 | -0.231 | 0.706 |
| secA2_input | -0.178 | 0.736 |
| delta_Rv3594 | 0.783 | 0.938 |
| delta_Rv3717 | 0.018 | 0.384 |
| delta_Rv3811 | 0.669 | -0.129 |
| delta_Rv0954 | 1.009 | 2.766 |
| PonA1 | 0.464 | 0.77 |
| EccD1_KO | -0.27 | 0.77 |
| EspI_KO | 0.724 | 1.243 |
| PE35_KO | 0.618 | 2.051 |
| PPE68_KO | 0.71 | 0.749 |
| glycerol2 | 0.605 | -0.588 |
| lignocerate | -0.056 | -0.605 |
| oleate | 0.532 | -0.819 |
| phosphatidylcholine | 0.248 | -0.296 |
| acetate | -0.236 | 0.326 |
| glucAc | -0.593 | -0.686 |
| Rv0950ko | -0.299 | -0.217 |
| Rv1096ko | -0.374 | 1.279 |
| Rv3684ko | -0.616 | 1.3 |
| delta_otsA_trehalose | 1.163 | 1.864 |