Top 10 genes with highest correlation to Rv0985c/mscL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3651/- | (cc=0.6364) | info on Rv3651/- |
| Rv3607c/folB | (cc=0.6142) | info on Rv3607c/folB |
| Rv2014/- | (cc=0.6021) | info on Rv2014/- |
| Rv3328c/sigJ | (cc=0.5879) | info on Rv3328c/sigJ |
| Rv1182/papA3 | (cc=0.5828) | info on Rv1182/papA3 |
| Rv0984/moaB2 | (cc=0.5721) | info on Rv0984/moaB2 |
| Rv2741/PE_PGRS47 | (cc=0.5712) | info on Rv2741/PE_PGRS47 |
| Rv0079/- | (cc=0.5603) | info on Rv0079/- |
| Rv1676/- | (cc=0.548) | info on Rv1676/- |
| Rv1646/PE17 | (cc=0.5406) | info on Rv1646/PE17 |
Correlation of Rv0985c/mscL with Rv0079/-
Normalized LFCs for Rv0985c/mscL:
(description and provenance of datasets)
| Rv0985c/mscL | Rv0079/- | |
| Fe_supp_jason_reseq | -0.2 | 0.786 |
| low_pH_jason_reseq | 0.597 | -0.656 |
| NO_jason_reseq | -0.593 | -3.499 |
| B6_jason_reseq | -0.109 | -0.146 |
| MHCII_jason_reseq | 0.374 | -0.022 |
| Isoniazid02 | 0.042 | -0.172 |
| Rifampicin4 | 0.563 | 0.295 |
| Ethambutol3 | 0.186 | -0.063 |
| Meropenem3 | 0.096 | 0.273 |
| Vancomycin16 | -0.151 | 0.289 |
| Rv2680_day32 | 0.223 | -1.975 |
| H37Rv_KO_MarP | 0.279 | 0.454 |
| hypoxia_3wks | -2.536 | -1.667 |
| hypoxia_6wks | -0.739 | 0.155 |
| glycerol | 0.889 | 0.554 |
| cholesterol | 0.508 | 0.54 |
| AJ | 0.553 | -0.837 |
| Bibs02 | 1.672 | -0.076 |
| Bibs02c | 1.34 | 0.265 |
| BL6 | -0.157 | -1.84 |
| BL6a | 0.188 | -1.356 |
| BXD01 | -0.865 | -1.657 |
| BXD010 | -0.396 | -1.017 |
| BXD011 | -0.69 | -2.414 |
| BXD03 | -1.197 | -0.69 |
| BXD04 | -1.516 | -1.119 |
| BXD05 | -1.172 | -1.056 |
| BXD06 | -0.951 | -1.678 |
| BXD07 | -0.184 | -0.972 |
| BXD08 | -1.049 | -1.957 |
| BXD09 | -0.853 | -1.809 |
| CAST | 1.306 | 0.245 |
| CCcont | 0.098 | -0.948 |
| DS01 | 1.357 | -0.763 |
| DS02 | 1.486 | -0.651 |
| DS04 | 0.537 | -0.534 |
| DS0c | 1.537 | -0.636 |
| GP01 | 0.059 | -0.476 |
| GP02 | 1.022 | -1.224 |
| GP0c | 0.946 | -0.846 |
| NOD | 1.695 | 0.988 |
| NZO | -0.038 | -0.597 |
| PWK | 0.22 | -0.165 |
| H37Rv_KO_CtpC | 0.245 | -1.004 |
| H37Rv_KO_CtpD | 0.106 | -0.481 |
| H37Rv_KO_Rv1272 | 0.604 | -0.406 |
| H37Rv_KO_SugABC | -1.654 | -0.436 |
| H37Rv_KO_MbtN | -0.046 | -0.723 |
| Trans05 | -0.483 | -1.393 |
| macrophage_unactivated | -0.821 | -2.326 |
| IL1 | -1.083 | -1.326 |
| Rapamycin | -0.988 | -1.43 |
| Tcell | -1.483 | -2.998 |
| GMCSF | -1.328 | -2.36 |
| IFNab | -1.521 | -1.862 |
| IFNg | -3.421 | -4.022 |
| IFNg_GMCSF1 | -0.691 | -3.098 |
| Rv1432_day32 | -0.052 | -0.272 |
| Rv1565c_day32 | -0.231 | 0.986 |
| secA2_input | -0.178 | 0.0 |
| delta_Rv3594 | 0.783 | 0.815 |
| delta_Rv3717 | 0.018 | -0.327 |
| delta_Rv3811 | 0.669 | 0.433 |
| delta_Rv0954 | 1.009 | 1.545 |
| PonA1 | 0.464 | 0.795 |
| EccD1_KO | -0.27 | -0.148 |
| EspI_KO | 0.724 | -0.148 |
| PE35_KO | 0.618 | -1.009 |
| PPE68_KO | 0.71 | -0.598 |
| glycerol2 | 0.605 | 0.427 |
| lignocerate | -0.056 | 0.111 |
| oleate | 0.532 | -0.403 |
| phosphatidylcholine | 0.248 | 0.232 |
| acetate | -0.236 | 0.223 |
| glucAc | -0.593 | 0.99 |
| Rv0950ko | -0.299 | 0.703 |
| Rv1096ko | -0.374 | 1.188 |
| Rv3684ko | -0.616 | 0.364 |
| delta_otsA_trehalose | 1.163 | 0.386 |