Top 10 genes with highest correlation to Rv0985c/mscL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3651/- | (cc=0.6364) | info on Rv3651/- |
| Rv3607c/folB | (cc=0.6142) | info on Rv3607c/folB |
| Rv2014/- | (cc=0.6021) | info on Rv2014/- |
| Rv3328c/sigJ | (cc=0.5879) | info on Rv3328c/sigJ |
| Rv1182/papA3 | (cc=0.5828) | info on Rv1182/papA3 |
| Rv0984/moaB2 | (cc=0.5721) | info on Rv0984/moaB2 |
| Rv2741/PE_PGRS47 | (cc=0.5712) | info on Rv2741/PE_PGRS47 |
| Rv0079/- | (cc=0.5603) | info on Rv0079/- |
| Rv1676/- | (cc=0.548) | info on Rv1676/- |
| Rv1646/PE17 | (cc=0.5406) | info on Rv1646/PE17 |
Correlation of Rv0985c/mscL with Rv1676/-
Normalized LFCs for Rv0985c/mscL:
(description and provenance of datasets)
| Rv0985c/mscL | Rv1676/- | |
| Fe_supp_jason_reseq | -0.2 | -0.818 |
| low_pH_jason_reseq | 0.597 | 0.34 |
| NO_jason_reseq | -0.593 | 0.533 |
| B6_jason_reseq | -0.109 | -0.411 |
| MHCII_jason_reseq | 0.374 | 0.103 |
| Isoniazid02 | 0.042 | 0.268 |
| Rifampicin4 | 0.563 | 0.726 |
| Ethambutol3 | 0.186 | 0.039 |
| Meropenem3 | 0.096 | 0.803 |
| Vancomycin16 | -0.151 | 0.99 |
| Rv2680_day32 | 0.223 | -0.393 |
| H37Rv_KO_MarP | 0.279 | 1.507 |
| hypoxia_3wks | -2.536 | 0.0 |
| hypoxia_6wks | -0.739 | 0.808 |
| glycerol | 0.889 | 1.181 |
| cholesterol | 0.508 | -0.118 |
| AJ | 0.553 | 1.062 |
| Bibs02 | 1.672 | 0.138 |
| Bibs02c | 1.34 | 0.85 |
| BL6 | -0.157 | -0.138 |
| BL6a | 0.188 | 0.502 |
| BXD01 | -0.865 | -0.695 |
| BXD010 | -0.396 | -0.8 |
| BXD011 | -0.69 | -0.34 |
| BXD03 | -1.197 | -1.209 |
| BXD04 | -1.516 | -0.508 |
| BXD05 | -1.172 | -0.148 |
| BXD06 | -0.951 | -1.465 |
| BXD07 | -0.184 | -0.865 |
| BXD08 | -1.049 | -1.794 |
| BXD09 | -0.853 | -1.256 |
| CAST | 1.306 | 0.853 |
| CCcont | 0.098 | 0.285 |
| DS01 | 1.357 | 1.381 |
| DS02 | 1.486 | 2.105 |
| DS04 | 0.537 | 0.753 |
| DS0c | 1.537 | 1.425 |
| GP01 | 0.059 | -0.527 |
| GP02 | 1.022 | 0.603 |
| GP0c | 0.946 | 0.16 |
| NOD | 1.695 | -0.381 |
| NZO | -0.038 | 0.587 |
| PWK | 0.22 | -0.053 |
| H37Rv_KO_CtpC | 0.245 | 0.309 |
| H37Rv_KO_CtpD | 0.106 | 2.042 |
| H37Rv_KO_Rv1272 | 0.604 | 1.968 |
| H37Rv_KO_SugABC | -1.654 | 1.851 |
| H37Rv_KO_MbtN | -0.046 | 1.596 |
| Trans05 | -0.483 | 1.077 |
| macrophage_unactivated | -0.821 | -1.502 |
| IL1 | -1.083 | -2.966 |
| Rapamycin | -0.988 | -3.069 |
| Tcell | -1.483 | -2.704 |
| GMCSF | -1.328 | -2.64 |
| IFNab | -1.521 | -3.607 |
| IFNg | -3.421 | -3.188 |
| IFNg_GMCSF1 | -0.691 | -2.13 |
| Rv1432_day32 | -0.052 | 1.46 |
| Rv1565c_day32 | -0.231 | 0.36 |
| secA2_input | -0.178 | -0.568 |
| delta_Rv3594 | 0.783 | -0.396 |
| delta_Rv3717 | 0.018 | -0.615 |
| delta_Rv3811 | 0.669 | -1.981 |
| delta_Rv0954 | 1.009 | 0.194 |
| PonA1 | 0.464 | 0.386 |
| EccD1_KO | -0.27 | 1.168 |
| EspI_KO | 0.724 | 1.372 |
| PE35_KO | 0.618 | 1.607 |
| PPE68_KO | 0.71 | 1.302 |
| glycerol2 | 0.605 | 0.581 |
| lignocerate | -0.056 | 0.843 |
| oleate | 0.532 | -0.163 |
| phosphatidylcholine | 0.248 | 0.542 |
| acetate | -0.236 | 1.15 |
| glucAc | -0.593 | 1.052 |
| Rv0950ko | -0.299 | -1.33 |
| Rv1096ko | -0.374 | 0.075 |
| Rv3684ko | -0.616 | 0.0 |
| delta_otsA_trehalose | 1.163 | -0.232 |