Top 10 genes with highest correlation to Rv0935/pstC1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3491/- | (cc=0.4838) | info on Rv3491/- |
| Rv3763/lpqH | (cc=0.4522) | info on Rv3763/lpqH |
| Rv2841c/nusA | (cc=0.4232) | info on Rv2841c/nusA |
| Rv1062/- | (cc=0.4183) | info on Rv1062/- |
| Rv2787/- | (cc=0.4127) | info on Rv2787/- |
| Rv0432/sodC | (cc=0.3953) | info on Rv0432/sodC |
| Rv3320c/vapC44 | (cc=0.3941) | info on Rv3320c/vapC44 |
| Rv0551c/fadD8 | (cc=0.3865) | info on Rv0551c/fadD8 |
| Rv3213c/- | (cc=0.3862) | info on Rv3213c/- |
| Rv0091/mtn | (cc=0.3804) | info on Rv0091/mtn |
Correlation of Rv0935/pstC1 with Rv3763/lpqH
Normalized LFCs for Rv0935/pstC1:
(description and provenance of datasets)
| Rv0935/pstC1 | Rv3763/lpqH | |
| Fe_supp_jason_reseq | 0.218 | -0.202 |
| low_pH_jason_reseq | -0.296 | -0.4 |
| NO_jason_reseq | 0.641 | 0.063 |
| B6_jason_reseq | -0.012 | -1.653 |
| MHCII_jason_reseq | -1.067 | -0.621 |
| Isoniazid02 | -0.18 | -0.784 |
| Rifampicin4 | -0.081 | 0.585 |
| Ethambutol3 | -0.009 | 0.574 |
| Meropenem3 | -0.344 | 0.397 |
| Vancomycin16 | 0.231 | 0.082 |
| Rv2680_day32 | 0.829 | -0.448 |
| H37Rv_KO_MarP | 0.353 | 0.382 |
| hypoxia_3wks | 0.195 | -0.63 |
| hypoxia_6wks | -0.061 | -0.654 |
| glycerol | 0.407 | -0.462 |
| cholesterol | 0.53 | -0.529 |
| AJ | -0.218 | -1.565 |
| Bibs02 | -1.661 | -1.174 |
| Bibs02c | 0.75 | -0.923 |
| BL6 | 0.376 | -0.726 |
| BL6a | 0.908 | 0.033 |
| BXD01 | 0.106 | -0.092 |
| BXD010 | 0.497 | -0.091 |
| BXD011 | -0.203 | 0.221 |
| BXD03 | 0.278 | 0.09 |
| BXD04 | 0.616 | 0.398 |
| BXD05 | 0.253 | 0.652 |
| BXD06 | 0.227 | 0.48 |
| BXD07 | 0.314 | 0.092 |
| BXD08 | -0.094 | 1.565 |
| BXD09 | 0.087 | 0.38 |
| CAST | 0.118 | 0.038 |
| CCcont | 0.401 | 0.818 |
| DS01 | 0.465 | 1.015 |
| DS02 | 0.474 | -0.498 |
| DS04 | -0.618 | -1.185 |
| DS0c | -0.306 | -0.115 |
| GP01 | 0.924 | 0.127 |
| GP02 | 0.022 | 0.214 |
| GP0c | -0.405 | 0.975 |
| NOD | -0.62 | -0.991 |
| NZO | -0.075 | -2.663 |
| PWK | -0.253 | 0.283 |
| H37Rv_KO_CtpC | -0.061 | -1.656 |
| H37Rv_KO_CtpD | -0.478 | 0.628 |
| H37Rv_KO_Rv1272 | -0.399 | -0.025 |
| H37Rv_KO_SugABC | -0.828 | -1.452 |
| H37Rv_KO_MbtN | -0.826 | -1.665 |
| Trans05 | -0.108 | 0.404 |
| macrophage_unactivated | 0.095 | -0.486 |
| IL1 | -0.905 | -1.833 |
| Rapamycin | -0.776 | -1.062 |
| Tcell | -0.57 | -1.336 |
| GMCSF | -0.766 | 0.042 |
| IFNab | -0.723 | -0.466 |
| IFNg | -0.048 | -1.037 |
| IFNg_GMCSF1 | 0.456 | -0.484 |
| Rv1432_day32 | -0.086 | -0.263 |
| Rv1565c_day32 | -0.856 | -1.148 |
| secA2_input | -0.069 | -0.687 |
| delta_Rv3594 | 0.927 | -0.509 |
| delta_Rv3717 | 0.917 | 0.0 |
| delta_Rv3811 | 0.543 | -0.495 |
| delta_Rv0954 | 0.982 | -1.796 |
| PonA1 | 0.224 | 0.254 |
| EccD1_KO | -0.506 | -2.789 |
| EspI_KO | -0.394 | -1.902 |
| PE35_KO | -1.035 | -1.423 |
| PPE68_KO | -0.573 | -2.134 |
| glycerol2 | 0.607 | 1.0 |
| lignocerate | 0.749 | 0.22 |
| oleate | 0.218 | -1.808 |
| phosphatidylcholine | 0.606 | -0.14 |
| acetate | 0.731 | 0.095 |
| glucAc | 0.548 | 0.749 |
| Rv0950ko | 0.615 | 1.161 |
| Rv1096ko | 0.615 | 2.787 |
| Rv3684ko | 1.159 | 1.189 |
| delta_otsA_trehalose | 2.255 | 1.311 |