Top 10 genes with highest correlation to Rv0935/pstC1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3491/- | (cc=0.4838) | info on Rv3491/- |
| Rv3763/lpqH | (cc=0.4522) | info on Rv3763/lpqH |
| Rv2841c/nusA | (cc=0.4232) | info on Rv2841c/nusA |
| Rv1062/- | (cc=0.4183) | info on Rv1062/- |
| Rv2787/- | (cc=0.4127) | info on Rv2787/- |
| Rv0432/sodC | (cc=0.3953) | info on Rv0432/sodC |
| Rv3320c/vapC44 | (cc=0.3941) | info on Rv3320c/vapC44 |
| Rv0551c/fadD8 | (cc=0.3865) | info on Rv0551c/fadD8 |
| Rv3213c/- | (cc=0.3862) | info on Rv3213c/- |
| Rv0091/mtn | (cc=0.3804) | info on Rv0091/mtn |
Correlation of Rv0935/pstC1 with Rv0432/sodC
Normalized LFCs for Rv0935/pstC1:
(description and provenance of datasets)
| Rv0935/pstC1 | Rv0432/sodC | |
| Fe_supp_jason_reseq | 0.218 | 0.606 |
| low_pH_jason_reseq | -0.296 | 0.609 |
| NO_jason_reseq | 0.641 | 0.289 |
| B6_jason_reseq | -0.012 | -1.779 |
| MHCII_jason_reseq | -1.067 | -1.466 |
| Isoniazid02 | -0.18 | -0.554 |
| Rifampicin4 | -0.081 | -1.752 |
| Ethambutol3 | -0.009 | -0.255 |
| Meropenem3 | -0.344 | -0.546 |
| Vancomycin16 | 0.231 | -1.21 |
| Rv2680_day32 | 0.829 | 0.147 |
| H37Rv_KO_MarP | 0.353 | 0.262 |
| hypoxia_3wks | 0.195 | -1.332 |
| hypoxia_6wks | -0.061 | -1.234 |
| glycerol | 0.407 | -0.696 |
| cholesterol | 0.53 | -0.31 |
| AJ | -0.218 | -1.519 |
| Bibs02 | -1.661 | -0.705 |
| Bibs02c | 0.75 | -0.762 |
| BL6 | 0.376 | 0.12 |
| BL6a | 0.908 | -0.257 |
| BXD01 | 0.106 | -0.753 |
| BXD010 | 0.497 | 0.518 |
| BXD011 | -0.203 | -0.25 |
| BXD03 | 0.278 | -0.886 |
| BXD04 | 0.616 | -1.171 |
| BXD05 | 0.253 | -1.014 |
| BXD06 | 0.227 | -0.382 |
| BXD07 | 0.314 | -0.061 |
| BXD08 | -0.094 | -0.54 |
| BXD09 | 0.087 | -0.062 |
| CAST | 0.118 | -1.91 |
| CCcont | 0.401 | 0.402 |
| DS01 | 0.465 | -1.745 |
| DS02 | 0.474 | -0.602 |
| DS04 | -0.618 | -1.872 |
| DS0c | -0.306 | -1.226 |
| GP01 | 0.924 | -0.292 |
| GP02 | 0.022 | -0.491 |
| GP0c | -0.405 | 0.254 |
| NOD | -0.62 | -1.298 |
| NZO | -0.075 | -0.21 |
| PWK | -0.253 | -1.823 |
| H37Rv_KO_CtpC | -0.061 | -0.42 |
| H37Rv_KO_CtpD | -0.478 | 0.185 |
| H37Rv_KO_Rv1272 | -0.399 | -0.697 |
| H37Rv_KO_SugABC | -0.828 | 0.609 |
| H37Rv_KO_MbtN | -0.826 | -0.345 |
| Trans05 | -0.108 | -1.436 |
| macrophage_unactivated | 0.095 | -0.833 |
| IL1 | -0.905 | 0.587 |
| Rapamycin | -0.776 | 0.11 |
| Tcell | -0.57 | 0.117 |
| GMCSF | -0.766 | -0.177 |
| IFNab | -0.723 | 0.193 |
| IFNg | -0.048 | 0.826 |
| IFNg_GMCSF1 | 0.456 | 0.113 |
| Rv1432_day32 | -0.086 | -1.246 |
| Rv1565c_day32 | -0.856 | -2.504 |
| secA2_input | -0.069 | -0.985 |
| delta_Rv3594 | 0.927 | 0.333 |
| delta_Rv3717 | 0.917 | -0.092 |
| delta_Rv3811 | 0.543 | 0.739 |
| delta_Rv0954 | 0.982 | 0.078 |
| PonA1 | 0.224 | 0.615 |
| EccD1_KO | -0.506 | -0.829 |
| EspI_KO | -0.394 | -0.95 |
| PE35_KO | -1.035 | -1.604 |
| PPE68_KO | -0.573 | -1.315 |
| glycerol2 | 0.607 | 0.464 |
| lignocerate | 0.749 | 0.991 |
| oleate | 0.218 | -0.44 |
| phosphatidylcholine | 0.606 | 1.158 |
| acetate | 0.731 | 1.049 |
| glucAc | 0.548 | 0.668 |
| Rv0950ko | 0.615 | 0.479 |
| Rv1096ko | 0.615 | 0.721 |
| Rv3684ko | 1.159 | 0.37 |
| delta_otsA_trehalose | 2.255 | 0.849 |