Top 10 genes with highest correlation to Rv0935/pstC1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3491/- | (cc=0.4838) | info on Rv3491/- |
| Rv3763/lpqH | (cc=0.4522) | info on Rv3763/lpqH |
| Rv2841c/nusA | (cc=0.4232) | info on Rv2841c/nusA |
| Rv1062/- | (cc=0.4183) | info on Rv1062/- |
| Rv2787/- | (cc=0.4127) | info on Rv2787/- |
| Rv0432/sodC | (cc=0.3953) | info on Rv0432/sodC |
| Rv3320c/vapC44 | (cc=0.3941) | info on Rv3320c/vapC44 |
| Rv0551c/fadD8 | (cc=0.3865) | info on Rv0551c/fadD8 |
| Rv3213c/- | (cc=0.3862) | info on Rv3213c/- |
| Rv0091/mtn | (cc=0.3804) | info on Rv0091/mtn |
Correlation of Rv0935/pstC1 with Rv3491/-
Normalized LFCs for Rv0935/pstC1:
(description and provenance of datasets)
| Rv0935/pstC1 | Rv3491/- | |
| Fe_supp_jason_reseq | 0.218 | 0.115 |
| low_pH_jason_reseq | -0.296 | -0.229 |
| NO_jason_reseq | 0.641 | -0.024 |
| B6_jason_reseq | -0.012 | 0.176 |
| MHCII_jason_reseq | -1.067 | -1.121 |
| Isoniazid02 | -0.18 | -0.515 |
| Rifampicin4 | -0.081 | 0.19 |
| Ethambutol3 | -0.009 | 1.906 |
| Meropenem3 | -0.344 | 0.788 |
| Vancomycin16 | 0.231 | 0.024 |
| Rv2680_day32 | 0.829 | 0.514 |
| H37Rv_KO_MarP | 0.353 | 1.047 |
| hypoxia_3wks | 0.195 | -0.239 |
| hypoxia_6wks | -0.061 | -0.388 |
| glycerol | 0.407 | -0.086 |
| cholesterol | 0.53 | -0.014 |
| AJ | -0.218 | -0.748 |
| Bibs02 | -1.661 | -0.532 |
| Bibs02c | 0.75 | -1.44 |
| BL6 | 0.376 | 0.299 |
| BL6a | 0.908 | -0.947 |
| BXD01 | 0.106 | 0.63 |
| BXD010 | 0.497 | 0.423 |
| BXD011 | -0.203 | -0.13 |
| BXD03 | 0.278 | -0.677 |
| BXD04 | 0.616 | 0.536 |
| BXD05 | 0.253 | 0.52 |
| BXD06 | 0.227 | -0.163 |
| BXD07 | 0.314 | 0.371 |
| BXD08 | -0.094 | -0.462 |
| BXD09 | 0.087 | -0.232 |
| CAST | 0.118 | -0.053 |
| CCcont | 0.401 | 0.34 |
| DS01 | 0.465 | 0.086 |
| DS02 | 0.474 | 0.421 |
| DS04 | -0.618 | -0.309 |
| DS0c | -0.306 | 0.06 |
| GP01 | 0.924 | 0.221 |
| GP02 | 0.022 | 1.348 |
| GP0c | -0.405 | -0.037 |
| NOD | -0.62 | -0.444 |
| NZO | -0.075 | -0.594 |
| PWK | -0.253 | -0.18 |
| H37Rv_KO_CtpC | -0.061 | -0.225 |
| H37Rv_KO_CtpD | -0.478 | -0.615 |
| H37Rv_KO_Rv1272 | -0.399 | -0.173 |
| H37Rv_KO_SugABC | -0.828 | -0.664 |
| H37Rv_KO_MbtN | -0.826 | -0.307 |
| Trans05 | -0.108 | -0.831 |
| macrophage_unactivated | 0.095 | 0.047 |
| IL1 | -0.905 | -0.744 |
| Rapamycin | -0.776 | -0.292 |
| Tcell | -0.57 | -0.101 |
| GMCSF | -0.766 | 0.198 |
| IFNab | -0.723 | -0.517 |
| IFNg | -0.048 | -0.233 |
| IFNg_GMCSF1 | 0.456 | 0.672 |
| Rv1432_day32 | -0.086 | -0.382 |
| Rv1565c_day32 | -0.856 | -0.689 |
| secA2_input | -0.069 | -0.075 |
| delta_Rv3594 | 0.927 | 0.402 |
| delta_Rv3717 | 0.917 | 0.014 |
| delta_Rv3811 | 0.543 | 0.378 |
| delta_Rv0954 | 0.982 | 0.305 |
| PonA1 | 0.224 | 0.844 |
| EccD1_KO | -0.506 | 0.411 |
| EspI_KO | -0.394 | -0.821 |
| PE35_KO | -1.035 | -0.073 |
| PPE68_KO | -0.573 | -0.106 |
| glycerol2 | 0.607 | 0.954 |
| lignocerate | 0.749 | 1.329 |
| oleate | 0.218 | 0.685 |
| phosphatidylcholine | 0.606 | 0.927 |
| acetate | 0.731 | 1.553 |
| glucAc | 0.548 | 0.944 |
| Rv0950ko | 0.615 | 0.024 |
| Rv1096ko | 0.615 | -0.148 |
| Rv3684ko | 1.159 | 0.105 |
| delta_otsA_trehalose | 2.255 | 1.736 |