Top 10 genes with highest correlation to Rv0797/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3327/- | (cc=0.6362) | info on Rv3327/- |
| Rv2701c/suhB | (cc=0.5058) | info on Rv2701c/suhB |
| Rv0039c/- | (cc=0.4582) | info on Rv0039c/- |
| Rv0095c/- | (cc=0.4567) | info on Rv0095c/- |
| Rv2859c/- | (cc=0.4407) | info on Rv2859c/- |
| Rv2715/- | (cc=0.4327) | info on Rv2715/- |
| Rv1935c/echA13 | (cc=0.429) | info on Rv1935c/echA13 |
| Rv2043c/pncA | (cc=0.4214) | info on Rv2043c/pncA |
| Rv2124c/metH | (cc=0.4191) | info on Rv2124c/metH |
| Rv1562c/treZ | (cc=0.3978) | info on Rv1562c/treZ |
Correlation of Rv0797/- with Rv2701c/suhB
Normalized LFCs for Rv0797/-:
(description and provenance of datasets)
| Rv0797/- | Rv2701c/suhB | |
| Fe_supp_jason_reseq | -0.488 | -1.904 |
| low_pH_jason_reseq | 0.877 | -1.004 |
| NO_jason_reseq | 0.018 | -0.163 |
| B6_jason_reseq | 0.073 | -0.536 |
| MHCII_jason_reseq | 0.285 | -0.453 |
| Isoniazid02 | 0.294 | 0.26 |
| Rifampicin4 | 0.866 | 0.322 |
| Ethambutol3 | 0.522 | 0.946 |
| Meropenem3 | 1.577 | 1.804 |
| Vancomycin16 | 0.748 | 0.34 |
| Rv2680_day32 | 0.23 | -0.475 |
| H37Rv_KO_MarP | -0.023 | -0.134 |
| hypoxia_3wks | 0.451 | -0.722 |
| hypoxia_6wks | -0.119 | -0.284 |
| glycerol | -0.622 | 0.325 |
| cholesterol | 1.999 | 1.235 |
| AJ | -0.234 | -0.141 |
| Bibs02 | -0.101 | 0.23 |
| Bibs02c | 0.452 | 0.105 |
| BL6 | 0.784 | 0.31 |
| BL6a | 0.367 | -0.433 |
| BXD01 | 0.379 | -1.354 |
| BXD010 | -0.02 | -0.149 |
| BXD011 | -0.15 | -0.959 |
| BXD03 | 0.007 | -0.57 |
| BXD04 | -0.047 | -0.37 |
| BXD05 | 0.685 | -0.727 |
| BXD06 | 0.174 | -0.571 |
| BXD07 | 0.64 | 0.14 |
| BXD08 | 0.102 | -0.65 |
| BXD09 | 0.059 | -0.816 |
| CAST | 0.267 | 0.499 |
| CCcont | 0.316 | -1.223 |
| DS01 | 0.406 | -0.448 |
| DS02 | -0.107 | -0.413 |
| DS04 | 0.611 | -0.176 |
| DS0c | -0.156 | -0.025 |
| GP01 | -0.333 | 1.237 |
| GP02 | 0.44 | 1.199 |
| GP0c | -0.028 | -0.222 |
| NOD | 0.151 | 0.493 |
| NZO | -0.189 | -0.577 |
| PWK | 0.264 | 0.475 |
| H37Rv_KO_CtpC | 0.358 | -1.403 |
| H37Rv_KO_CtpD | 0.079 | -1.06 |
| H37Rv_KO_Rv1272 | -0.812 | -1.481 |
| H37Rv_KO_SugABC | 0.601 | -0.441 |
| H37Rv_KO_MbtN | -0.459 | -0.927 |
| Trans05 | -0.365 | -0.236 |
| macrophage_unactivated | -0.18 | -1.979 |
| IL1 | 0.142 | -0.35 |
| Rapamycin | 0.371 | -0.193 |
| Tcell | -0.456 | -1.916 |
| GMCSF | 0.055 | -0.863 |
| IFNab | -0.444 | -1.128 |
| IFNg | 0.219 | 0.251 |
| IFNg_GMCSF1 | 0.258 | -0.405 |
| Rv1432_day32 | 0.482 | -0.639 |
| Rv1565c_day32 | -0.161 | -0.325 |
| secA2_input | -0.441 | 0.85 |
| delta_Rv3594 | -0.548 | -0.337 |
| delta_Rv3717 | 0.522 | 0.413 |
| delta_Rv3811 | 0.192 | -0.247 |
| delta_Rv0954 | 0.132 | -0.509 |
| PonA1 | 0.376 | 0.13 |
| EccD1_KO | 0.701 | 0.829 |
| EspI_KO | 1.001 | 1.446 |
| PE35_KO | 0.828 | 0.032 |
| PPE68_KO | 0.477 | -0.544 |
| glycerol2 | -0.071 | -0.75 |
| lignocerate | 0.06 | -1.076 |
| oleate | -0.391 | -0.298 |
| phosphatidylcholine | 0.008 | -0.926 |
| acetate | 0.605 | -1.709 |
| glucAc | 0.172 | -1.251 |
| Rv0950ko | 0.178 | 0.181 |
| Rv1096ko | 1.393 | 1.252 |
| Rv3684ko | 0.871 | 1.238 |
| delta_otsA_trehalose | 2.102 | 0.972 |