Top 10 genes with highest correlation to Rv0797/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3327/- | (cc=0.6362) | info on Rv3327/- |
| Rv2701c/suhB | (cc=0.5058) | info on Rv2701c/suhB |
| Rv0039c/- | (cc=0.4582) | info on Rv0039c/- |
| Rv0095c/- | (cc=0.4567) | info on Rv0095c/- |
| Rv2859c/- | (cc=0.4407) | info on Rv2859c/- |
| Rv2715/- | (cc=0.4327) | info on Rv2715/- |
| Rv1935c/echA13 | (cc=0.429) | info on Rv1935c/echA13 |
| Rv2043c/pncA | (cc=0.4214) | info on Rv2043c/pncA |
| Rv2124c/metH | (cc=0.4191) | info on Rv2124c/metH |
| Rv1562c/treZ | (cc=0.3978) | info on Rv1562c/treZ |
Correlation of Rv0797/- with Rv2124c/metH
Normalized LFCs for Rv0797/-:
(description and provenance of datasets)
| Rv0797/- | Rv2124c/metH | |
| Fe_supp_jason_reseq | -0.488 | -0.156 |
| low_pH_jason_reseq | 0.877 | -0.018 |
| NO_jason_reseq | 0.018 | -0.113 |
| B6_jason_reseq | 0.073 | 0.535 |
| MHCII_jason_reseq | 0.285 | -1.726 |
| Isoniazid02 | 0.294 | 0.512 |
| Rifampicin4 | 0.866 | 0.2 |
| Ethambutol3 | 0.522 | 1.226 |
| Meropenem3 | 1.577 | 1.572 |
| Vancomycin16 | 0.748 | -0.069 |
| Rv2680_day32 | 0.23 | 0.304 |
| H37Rv_KO_MarP | -0.023 | -0.169 |
| hypoxia_3wks | 0.451 | 0.518 |
| hypoxia_6wks | -0.119 | 1.28 |
| glycerol | -0.622 | -0.856 |
| cholesterol | 1.999 | -0.067 |
| AJ | -0.234 | -0.59 |
| Bibs02 | -0.101 | -0.846 |
| Bibs02c | 0.452 | -0.335 |
| BL6 | 0.784 | 0.469 |
| BL6a | 0.367 | -0.145 |
| BXD01 | 0.379 | -0.209 |
| BXD010 | -0.02 | -0.659 |
| BXD011 | -0.15 | -0.204 |
| BXD03 | 0.007 | -0.119 |
| BXD04 | -0.047 | 0.039 |
| BXD05 | 0.685 | -0.185 |
| BXD06 | 0.174 | -0.687 |
| BXD07 | 0.64 | -0.968 |
| BXD08 | 0.102 | -0.603 |
| BXD09 | 0.059 | -0.465 |
| CAST | 0.267 | -0.25 |
| CCcont | 0.316 | -0.507 |
| DS01 | 0.406 | 0.044 |
| DS02 | -0.107 | 0.214 |
| DS04 | 0.611 | 0.573 |
| DS0c | -0.156 | -0.464 |
| GP01 | -0.333 | -0.702 |
| GP02 | 0.44 | -0.53 |
| GP0c | -0.028 | -0.237 |
| NOD | 0.151 | -1.46 |
| NZO | -0.189 | -1.578 |
| PWK | 0.264 | -0.405 |
| H37Rv_KO_CtpC | 0.358 | -0.467 |
| H37Rv_KO_CtpD | 0.079 | -0.302 |
| H37Rv_KO_Rv1272 | -0.812 | -0.479 |
| H37Rv_KO_SugABC | 0.601 | 0.074 |
| H37Rv_KO_MbtN | -0.459 | -0.083 |
| Trans05 | -0.365 | -0.579 |
| macrophage_unactivated | -0.18 | -0.54 |
| IL1 | 0.142 | -0.869 |
| Rapamycin | 0.371 | -0.73 |
| Tcell | -0.456 | -0.557 |
| GMCSF | 0.055 | -0.385 |
| IFNab | -0.444 | -0.363 |
| IFNg | 0.219 | 0.409 |
| IFNg_GMCSF1 | 0.258 | -0.622 |
| Rv1432_day32 | 0.482 | 0.0 |
| Rv1565c_day32 | -0.161 | -1.602 |
| secA2_input | -0.441 | -0.632 |
| delta_Rv3594 | -0.548 | -0.015 |
| delta_Rv3717 | 0.522 | -0.248 |
| delta_Rv3811 | 0.192 | -0.241 |
| delta_Rv0954 | 0.132 | -0.27 |
| PonA1 | 0.376 | -0.201 |
| EccD1_KO | 0.701 | 0.161 |
| EspI_KO | 1.001 | 0.174 |
| PE35_KO | 0.828 | -0.073 |
| PPE68_KO | 0.477 | 0.157 |
| glycerol2 | -0.071 | 0.488 |
| lignocerate | 0.06 | 0.373 |
| oleate | -0.391 | 0.326 |
| phosphatidylcholine | 0.008 | 0.338 |
| acetate | 0.605 | -0.043 |
| glucAc | 0.172 | 0.249 |
| Rv0950ko | 0.178 | 0.039 |
| Rv1096ko | 1.393 | 0.235 |
| Rv3684ko | 0.871 | 0.727 |
| delta_otsA_trehalose | 2.102 | 1.184 |