Top 10 genes with highest correlation to Rv0774c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3365c/- | (cc=0.5138) | info on Rv3365c/- |
| Rv0354c/PPE7 | (cc=0.4637) | info on Rv0354c/PPE7 |
| Rv0811c/- | (cc=0.4382) | info on Rv0811c/- |
| Rv0194/- | (cc=0.4352) | info on Rv0194/- |
| Rv2882c/frr | (cc=0.4327) | info on Rv2882c/frr |
| Rv0232/- | (cc=0.4294) | info on Rv0232/- |
| Rv0276/- | (cc=0.4269) | info on Rv0276/- |
| Rv0701/rplC | (cc=0.4177) | info on Rv0701/rplC |
| Rv0033/acpA | (cc=0.4176) | info on Rv0033/acpA |
| Rv0301/vapC2 | (cc=0.4167) | info on Rv0301/vapC2 |
Correlation of Rv0774c/- with Rv2882c/frr
Normalized LFCs for Rv0774c/-:
(description and provenance of datasets)
| Rv0774c/- | Rv2882c/frr | |
| Fe_supp_jason_reseq | -0.415 | 0.0 |
| low_pH_jason_reseq | -0.621 | 0.0 |
| NO_jason_reseq | -0.129 | 0.0 |
| B6_jason_reseq | -0.731 | 0.0 |
| MHCII_jason_reseq | -0.818 | 0.0 |
| Isoniazid02 | -1.125 | -0.201 |
| Rifampicin4 | 0.902 | 0.341 |
| Ethambutol3 | -0.918 | 0.293 |
| Meropenem3 | -0.926 | 0.0 |
| Vancomycin16 | 0.273 | 0.923 |
| Rv2680_day32 | 1.947 | 0.0 |
| H37Rv_KO_MarP | -0.291 | 0.371 |
| hypoxia_3wks | -0.311 | 0.0 |
| hypoxia_6wks | -0.04 | 0.0 |
| glycerol | -0.443 | -0.202 |
| cholesterol | 0.378 | -0.145 |
| AJ | -1.0 | 0.212 |
| Bibs02 | 0.101 | -0.183 |
| Bibs02c | 0.252 | 0.527 |
| BL6 | 0.576 | -0.125 |
| BL6a | 0.359 | -0.198 |
| BXD01 | 0.054 | -0.13 |
| BXD010 | 0.035 | -0.128 |
| BXD011 | -0.193 | -0.127 |
| BXD03 | 0.292 | 0.0 |
| BXD04 | 0.44 | -0.124 |
| BXD05 | -0.368 | -0.135 |
| BXD06 | -0.118 | 0.762 |
| BXD07 | 0.234 | -0.138 |
| BXD08 | 0.16 | -0.133 |
| BXD09 | -0.19 | -0.14 |
| CAST | 1.261 | -0.23 |
| CCcont | -0.251 | -0.149 |
| DS01 | 0.816 | -0.236 |
| DS02 | 0.419 | -0.217 |
| DS04 | 1.779 | -0.194 |
| DS0c | -0.514 | 0.0 |
| GP01 | 1.076 | -0.099 |
| GP02 | 0.963 | -0.083 |
| GP0c | 0.501 | -0.13 |
| NOD | -0.164 | -0.225 |
| NZO | -0.087 | 0.182 |
| PWK | 0.904 | 1.009 |
| H37Rv_KO_CtpC | 0.673 | -0.162 |
| H37Rv_KO_CtpD | 1.117 | -0.127 |
| H37Rv_KO_Rv1272 | -1.19 | -0.141 |
| H37Rv_KO_SugABC | -1.408 | -0.099 |
| H37Rv_KO_MbtN | 0.043 | -0.103 |
| Trans05 | 1.589 | -0.131 |
| macrophage_unactivated | 1.525 | 0.0 |
| IL1 | -0.632 | 0.0 |
| Rapamycin | 0.829 | 0.0 |
| Tcell | 0.189 | 0.0 |
| GMCSF | -0.684 | 0.0 |
| IFNab | 0.913 | 0.0 |
| IFNg | 0.257 | 0.0 |
| IFNg_GMCSF1 | 0.949 | 0.0 |
| Rv1432_day32 | 0.404 | 0.0 |
| Rv1565c_day32 | -1.989 | 0.0 |
| secA2_input | 1.212 | 0.568 |
| delta_Rv3594 | -1.423 | -0.176 |
| delta_Rv3717 | -0.25 | -0.477 |
| delta_Rv3811 | -1.013 | -0.564 |
| delta_Rv0954 | -0.174 | -0.49 |
| PonA1 | -0.635 | -0.437 |
| EccD1_KO | -1.145 | -2.519 |
| EspI_KO | -1.503 | -2.185 |
| PE35_KO | -1.727 | -2.234 |
| PPE68_KO | -1.619 | -2.451 |
| glycerol2 | 0.209 | 0.0 |
| lignocerate | 0.479 | 0.0 |
| oleate | 1.17 | 0.0 |
| phosphatidylcholine | 0.336 | 0.0 |
| acetate | -0.444 | 0.0 |
| glucAc | 0.622 | 0.0 |
| Rv0950ko | 0.286 | 1.462 |
| Rv1096ko | 2.117 | 1.143 |
| Rv3684ko | 2.492 | 0.0 |
| delta_otsA_trehalose | 0.139 | 0.0 |