Top 10 genes with highest correlation to Rv0774c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3365c/- | (cc=0.5138) | info on Rv3365c/- |
Rv0354c/PPE7 | (cc=0.4637) | info on Rv0354c/PPE7 |
Rv0811c/- | (cc=0.4382) | info on Rv0811c/- |
Rv0194/- | (cc=0.4352) | info on Rv0194/- |
Rv2882c/frr | (cc=0.4327) | info on Rv2882c/frr |
Rv0232/- | (cc=0.4294) | info on Rv0232/- |
Rv0276/- | (cc=0.4269) | info on Rv0276/- |
Rv0701/rplC | (cc=0.4177) | info on Rv0701/rplC |
Rv0033/acpA | (cc=0.4176) | info on Rv0033/acpA |
Rv0301/vapC2 | (cc=0.4167) | info on Rv0301/vapC2 |
Correlation of Rv0774c/- with Rv3365c/-
Normalized LFCs for Rv0774c/-:
(description and provenance of datasets)
Rv0774c/- | Rv3365c/- | |
Fe_supp_jason_reseq | -0.415 | -0.106 |
low_pH_jason_reseq | -0.621 | -1.225 |
NO_jason_reseq | -0.129 | -0.656 |
B6_jason_reseq | -0.731 | 0.089 |
MHCII_jason_reseq | -0.818 | -0.529 |
Isoniazid02 | -1.125 | -1.793 |
Rifampicin4 | 0.902 | -0.341 |
Ethambutol3 | -0.918 | -1.694 |
Meropenem3 | -0.926 | -0.516 |
Vancomycin16 | 0.273 | -0.114 |
Rv2680_day32 | 1.947 | 0.184 |
H37Rv_KO_MarP | -0.291 | -1.158 |
hypoxia_3wks | -0.311 | -0.61 |
hypoxia_6wks | -0.04 | -0.038 |
glycerol | -0.443 | -0.647 |
cholesterol | 0.378 | -0.054 |
AJ | -1.0 | 0.0 |
Bibs02 | 0.101 | -0.24 |
Bibs02c | 0.252 | 0.203 |
BL6 | 0.576 | 0.24 |
BL6a | 0.359 | 0.27 |
BXD01 | 0.054 | 0.326 |
BXD010 | 0.035 | 0.149 |
BXD011 | -0.193 | -0.009 |
BXD03 | 0.292 | 0.4 |
BXD04 | 0.44 | 0.184 |
BXD05 | -0.368 | 0.183 |
BXD06 | -0.118 | 0.256 |
BXD07 | 0.234 | 0.171 |
BXD08 | 0.16 | 0.181 |
BXD09 | -0.19 | 0.209 |
CAST | 1.261 | -0.174 |
CCcont | -0.251 | 0.155 |
DS01 | 0.816 | 0.068 |
DS02 | 0.419 | 0.769 |
DS04 | 1.779 | 0.859 |
DS0c | -0.514 | 0.481 |
GP01 | 1.076 | 0.523 |
GP02 | 0.963 | 1.221 |
GP0c | 0.501 | 0.135 |
NOD | -0.164 | 0.277 |
NZO | -0.087 | -0.214 |
PWK | 0.904 | 0.352 |
H37Rv_KO_CtpC | 0.673 | 0.058 |
H37Rv_KO_CtpD | 1.117 | 0.875 |
H37Rv_KO_Rv1272 | -1.19 | 0.362 |
H37Rv_KO_SugABC | -1.408 | 0.654 |
H37Rv_KO_MbtN | 0.043 | 0.401 |
Trans05 | 1.589 | 0.908 |
macrophage_unactivated | 1.525 | 0.615 |
IL1 | -0.632 | 0.418 |
Rapamycin | 0.829 | 0.285 |
Tcell | 0.189 | 0.055 |
GMCSF | -0.684 | 0.222 |
IFNab | 0.913 | 1.267 |
IFNg | 0.257 | 0.738 |
IFNg_GMCSF1 | 0.949 | 0.49 |
Rv1432_day32 | 0.404 | 0.471 |
Rv1565c_day32 | -1.989 | -0.649 |
secA2_input | 1.212 | -0.21 |
delta_Rv3594 | -1.423 | 0.014 |
delta_Rv3717 | -0.25 | 0.177 |
delta_Rv3811 | -1.013 | -0.217 |
delta_Rv0954 | -0.174 | -0.226 |
PonA1 | -0.635 | 0.335 |
EccD1_KO | -1.145 | -0.059 |
EspI_KO | -1.503 | -0.402 |
PE35_KO | -1.727 | -0.773 |
PPE68_KO | -1.619 | -0.419 |
glycerol2 | 0.209 | 0.573 |
lignocerate | 0.479 | 0.302 |
oleate | 1.17 | -0.132 |
phosphatidylcholine | 0.336 | -0.623 |
acetate | -0.444 | 1.385 |
glucAc | 0.622 | 0.873 |
Rv0950ko | 0.286 | -0.072 |
Rv1096ko | 2.117 | 1.179 |
Rv3684ko | 2.492 | 1.009 |
delta_otsA_trehalose | 0.139 | 0.304 |