Top 10 genes with highest correlation to Rv0713/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2951c/- | (cc=0.5467) | info on Rv2951c/- |
| Rv2953/- | (cc=0.5446) | info on Rv2953/- |
| Rv2429/ahpD | (cc=0.5404) | info on Rv2429/ahpD |
| Rv2284/lipM | (cc=0.5144) | info on Rv2284/lipM |
| Rv3843c/- | (cc=0.5073) | info on Rv3843c/- |
| Rv3647c/- | (cc=0.4862) | info on Rv3647c/- |
| Rv2345/- | (cc=0.4822) | info on Rv2345/- |
| Rv2068c/blaC | (cc=0.4819) | info on Rv2068c/blaC |
| Rv1221/sigE | (cc=0.4515) | info on Rv1221/sigE |
| Rv1916/aceAb | (cc=0.4472) | info on Rv1916/aceAb |
Correlation of Rv0713/- with Rv2068c/blaC
Normalized LFCs for Rv0713/-:
(description and provenance of datasets)
| Rv0713/- | Rv2068c/blaC | |
| Fe_supp_jason_reseq | 1.217 | 0.755 |
| low_pH_jason_reseq | -0.4 | -0.368 |
| NO_jason_reseq | -0.223 | -0.399 |
| B6_jason_reseq | 0.443 | 0.172 |
| MHCII_jason_reseq | 1.131 | 0.69 |
| Isoniazid02 | -1.464 | -0.454 |
| Rifampicin4 | 0.146 | 0.514 |
| Ethambutol3 | -0.872 | -0.106 |
| Meropenem3 | -1.261 | -5.583 |
| Vancomycin16 | -0.204 | -0.478 |
| Rv2680_day32 | -0.5 | 0.186 |
| H37Rv_KO_MarP | 0.491 | 0.216 |
| hypoxia_3wks | 0.367 | 0.231 |
| hypoxia_6wks | 0.355 | -0.219 |
| glycerol | -0.781 | 0.189 |
| cholesterol | -0.668 | 0.04 |
| AJ | -0.203 | -0.324 |
| Bibs02 | -0.191 | -0.07 |
| Bibs02c | -0.149 | 0.215 |
| BL6 | -0.166 | 0.286 |
| BL6a | -0.228 | 0.143 |
| BXD01 | 0.261 | -0.267 |
| BXD010 | 0.199 | 0.241 |
| BXD011 | -0.271 | 0.038 |
| BXD03 | -0.077 | -0.285 |
| BXD04 | 0.179 | 0.281 |
| BXD05 | 0.188 | -0.365 |
| BXD06 | 0.225 | -0.09 |
| BXD07 | -0.264 | -0.134 |
| BXD08 | 0.496 | -0.277 |
| BXD09 | -0.211 | 0.069 |
| CAST | -0.527 | -0.155 |
| CCcont | 0.171 | -0.149 |
| DS01 | -0.494 | -0.229 |
| DS02 | -0.273 | -0.323 |
| DS04 | -0.467 | -0.322 |
| DS0c | -0.405 | -0.083 |
| GP01 | -0.61 | 0.285 |
| GP02 | -1.011 | -0.947 |
| GP0c | -1.142 | -0.348 |
| NOD | -0.386 | -0.433 |
| NZO | -1.05 | -0.415 |
| PWK | 0.148 | 0.0 |
| H37Rv_KO_CtpC | -0.585 | -0.127 |
| H37Rv_KO_CtpD | 0.152 | 0.801 |
| H37Rv_KO_Rv1272 | -0.472 | -0.103 |
| H37Rv_KO_SugABC | 0.26 | 0.386 |
| H37Rv_KO_MbtN | 0.537 | -0.129 |
| Trans05 | 0.346 | 0.777 |
| macrophage_unactivated | 0.249 | -0.366 |
| IL1 | -0.567 | 0.279 |
| Rapamycin | -0.832 | -0.516 |
| Tcell | -0.466 | -0.303 |
| GMCSF | 0.066 | -0.127 |
| IFNab | -0.475 | -0.695 |
| IFNg | -0.615 | -0.353 |
| IFNg_GMCSF1 | -0.899 | 0.44 |
| Rv1432_day32 | -0.72 | 0.117 |
| Rv1565c_day32 | -0.158 | -0.144 |
| secA2_input | -0.495 | 0.492 |
| delta_Rv3594 | 0.081 | 0.652 |
| delta_Rv3717 | -0.063 | 0.647 |
| delta_Rv3811 | 0.171 | 0.748 |
| delta_Rv0954 | -0.191 | 0.8 |
| PonA1 | -0.063 | 0.384 |
| EccD1_KO | 0.306 | -0.332 |
| EspI_KO | 0.533 | -0.277 |
| PE35_KO | 0.123 | -0.041 |
| PPE68_KO | 0.134 | -0.112 |
| glycerol2 | 0.751 | 0.926 |
| lignocerate | 0.581 | 0.883 |
| oleate | 0.784 | 1.144 |
| phosphatidylcholine | 0.829 | 1.157 |
| acetate | -0.248 | 0.065 |
| glucAc | -0.525 | 0.309 |
| Rv0950ko | -0.163 | 0.178 |
| Rv1096ko | -0.377 | -0.217 |
| Rv3684ko | -0.652 | 0.226 |
| delta_otsA_trehalose | 1.203 | 0.822 |