Top 10 genes with highest correlation to Rv0713/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2951c/- | (cc=0.5467) | info on Rv2951c/- |
| Rv2953/- | (cc=0.5446) | info on Rv2953/- |
| Rv2429/ahpD | (cc=0.5404) | info on Rv2429/ahpD |
| Rv2284/lipM | (cc=0.5144) | info on Rv2284/lipM |
| Rv3843c/- | (cc=0.5073) | info on Rv3843c/- |
| Rv3647c/- | (cc=0.4862) | info on Rv3647c/- |
| Rv2345/- | (cc=0.4822) | info on Rv2345/- |
| Rv2068c/blaC | (cc=0.4819) | info on Rv2068c/blaC |
| Rv1221/sigE | (cc=0.4515) | info on Rv1221/sigE |
| Rv1916/aceAb | (cc=0.4472) | info on Rv1916/aceAb |
Correlation of Rv0713/- with Rv1221/sigE
Normalized LFCs for Rv0713/-:
(description and provenance of datasets)
| Rv0713/- | Rv1221/sigE | |
| Fe_supp_jason_reseq | 1.217 | 2.602 |
| low_pH_jason_reseq | -0.4 | 0.156 |
| NO_jason_reseq | -0.223 | 0.895 |
| B6_jason_reseq | 0.443 | 0.752 |
| MHCII_jason_reseq | 1.131 | 1.311 |
| Isoniazid02 | -1.464 | 0.682 |
| Rifampicin4 | 0.146 | 0.146 |
| Ethambutol3 | -0.872 | -0.646 |
| Meropenem3 | -1.261 | -0.212 |
| Vancomycin16 | -0.204 | -0.305 |
| Rv2680_day32 | -0.5 | 0.651 |
| H37Rv_KO_MarP | 0.491 | -0.313 |
| hypoxia_3wks | 0.367 | -0.128 |
| hypoxia_6wks | 0.355 | -1.495 |
| glycerol | -0.781 | -0.967 |
| cholesterol | -0.668 | -0.197 |
| AJ | -0.203 | -0.373 |
| Bibs02 | -0.191 | -0.698 |
| Bibs02c | -0.149 | -0.39 |
| BL6 | -0.166 | -1.107 |
| BL6a | -0.228 | -0.472 |
| BXD01 | 0.261 | -0.58 |
| BXD010 | 0.199 | -0.749 |
| BXD011 | -0.271 | -1.333 |
| BXD03 | -0.077 | -0.79 |
| BXD04 | 0.179 | -1.035 |
| BXD05 | 0.188 | 0.33 |
| BXD06 | 0.225 | -0.832 |
| BXD07 | -0.264 | -1.713 |
| BXD08 | 0.496 | -1.392 |
| BXD09 | -0.211 | -0.374 |
| CAST | -0.527 | -1.927 |
| CCcont | 0.171 | -0.397 |
| DS01 | -0.494 | 0.286 |
| DS02 | -0.273 | -0.35 |
| DS04 | -0.467 | -0.929 |
| DS0c | -0.405 | -0.193 |
| GP01 | -0.61 | -1.292 |
| GP02 | -1.011 | -0.92 |
| GP0c | -1.142 | -1.702 |
| NOD | -0.386 | -1.487 |
| NZO | -1.05 | -1.669 |
| PWK | 0.148 | -1.147 |
| H37Rv_KO_CtpC | -0.585 | -1.359 |
| H37Rv_KO_CtpD | 0.152 | -0.113 |
| H37Rv_KO_Rv1272 | -0.472 | -1.846 |
| H37Rv_KO_SugABC | 0.26 | -1.159 |
| H37Rv_KO_MbtN | 0.537 | -0.459 |
| Trans05 | 0.346 | 0.23 |
| macrophage_unactivated | 0.249 | 0.202 |
| IL1 | -0.567 | -0.629 |
| Rapamycin | -0.832 | -0.424 |
| Tcell | -0.466 | -1.212 |
| GMCSF | 0.066 | -0.269 |
| IFNab | -0.475 | -0.641 |
| IFNg | -0.615 | -0.994 |
| IFNg_GMCSF1 | -0.899 | -2.049 |
| Rv1432_day32 | -0.72 | -0.139 |
| Rv1565c_day32 | -0.158 | 0.158 |
| secA2_input | -0.495 | -0.931 |
| delta_Rv3594 | 0.081 | 0.057 |
| delta_Rv3717 | -0.063 | -0.736 |
| delta_Rv3811 | 0.171 | -0.171 |
| delta_Rv0954 | -0.191 | -0.149 |
| PonA1 | -0.063 | 1.154 |
| EccD1_KO | 0.306 | -0.28 |
| EspI_KO | 0.533 | 1.383 |
| PE35_KO | 0.123 | 2.856 |
| PPE68_KO | 0.134 | 2.003 |
| glycerol2 | 0.751 | 0.42 |
| lignocerate | 0.581 | -0.647 |
| oleate | 0.784 | 0.457 |
| phosphatidylcholine | 0.829 | 0.513 |
| acetate | -0.248 | -0.949 |
| glucAc | -0.525 | -1.283 |
| Rv0950ko | -0.163 | -1.643 |
| Rv1096ko | -0.377 | -1.644 |
| Rv3684ko | -0.652 | -2.05 |
| delta_otsA_trehalose | 1.203 | 0.322 |