Top 10 genes with highest correlation to Rv0668/rpoC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3419c/gcp | (cc=0.704) | info on Rv3419c/gcp |
| Rv1239c/corA | (cc=0.6995) | info on Rv1239c/corA |
| Rv1925/fadD31 | (cc=0.683) | info on Rv1925/fadD31 |
| Rv3842c/glpQ1 | (cc=0.6618) | info on Rv3842c/glpQ1 |
| Rv2793c/truB | (cc=0.6459) | info on Rv2793c/truB |
| Rv0818/- | (cc=0.6446) | info on Rv0818/- |
| Rv3421c/- | (cc=0.6365) | info on Rv3421c/- |
| Rv2444c/rne | (cc=0.6251) | info on Rv2444c/rne |
| Rv0055/rpsR1 | (cc=0.6145) | info on Rv0055/rpsR1 |
| Rv3278c/- | (cc=0.6074) | info on Rv3278c/- |
Correlation of Rv0668/rpoC with Rv3421c/-
Normalized LFCs for Rv0668/rpoC:
(description and provenance of datasets)
| Rv0668/rpoC | Rv3421c/- | |
| Fe_supp_jason_reseq | 0.319 | -1.268 |
| low_pH_jason_reseq | 2.259 | 0.157 |
| NO_jason_reseq | 2.809 | 2.221 |
| B6_jason_reseq | 1.836 | 0.53 |
| MHCII_jason_reseq | -0.149 | -2.712 |
| Isoniazid02 | -0.108 | -0.201 |
| Rifampicin4 | 1.172 | 2.134 |
| Ethambutol3 | -0.626 | 1.135 |
| Meropenem3 | -0.182 | 0.648 |
| Vancomycin16 | -0.196 | 0.923 |
| Rv2680_day32 | 0.0 | 0.05 |
| H37Rv_KO_MarP | 0.203 | 1.008 |
| hypoxia_3wks | -1.934 | -1.224 |
| hypoxia_6wks | 1.293 | -0.411 |
| glycerol | 0.12 | 1.279 |
| cholesterol | 0.0 | -0.89 |
| AJ | 0.934 | 0.698 |
| Bibs02 | -0.371 | 0.103 |
| Bibs02c | 0.124 | -0.258 |
| BL6 | 1.017 | 1.757 |
| BL6a | 1.175 | 1.492 |
| BXD01 | 2.02 | 2.681 |
| BXD010 | 1.496 | 2.829 |
| BXD011 | 2.698 | 2.128 |
| BXD03 | 1.173 | 1.94 |
| BXD04 | 2.865 | 3.241 |
| BXD05 | 2.213 | 2.264 |
| BXD06 | 1.994 | 2.67 |
| BXD07 | 1.825 | 2.084 |
| BXD08 | 2.118 | 1.965 |
| BXD09 | 0.974 | 1.816 |
| CAST | 1.023 | 1.86 |
| CCcont | 0.663 | 2.288 |
| DS01 | 0.522 | -0.802 |
| DS02 | 0.129 | -0.922 |
| DS04 | 0.523 | 0.11 |
| DS0c | -0.137 | -0.737 |
| GP01 | -0.277 | -0.607 |
| GP02 | -0.303 | -0.353 |
| GP0c | 0.577 | -0.077 |
| NOD | -0.142 | 1.422 |
| NZO | 0.886 | 0.22 |
| PWK | 1.537 | 2.568 |
| H37Rv_KO_CtpC | -0.455 | -0.096 |
| H37Rv_KO_CtpD | 0.51 | 1.298 |
| H37Rv_KO_Rv1272 | 0.239 | 0.542 |
| H37Rv_KO_SugABC | 1.074 | 2.209 |
| H37Rv_KO_MbtN | 1.0 | 0.963 |
| Trans05 | 1.024 | 0.827 |
| macrophage_unactivated | -0.581 | -1.146 |
| IL1 | -1.406 | -1.391 |
| Rapamycin | -0.368 | -1.114 |
| Tcell | 0.362 | 0.0 |
| GMCSF | -1.046 | -0.108 |
| IFNab | -0.363 | 1.255 |
| IFNg | -0.673 | -2.079 |
| IFNg_GMCSF1 | -1.012 | -1.141 |
| Rv1432_day32 | 0.139 | -0.804 |
| Rv1565c_day32 | -0.588 | -0.842 |
| secA2_input | 0.445 | -0.424 |
| delta_Rv3594 | -0.061 | -2.492 |
| delta_Rv3717 | 1.233 | -0.142 |
| delta_Rv3811 | 0.559 | -1.09 |
| delta_Rv0954 | -1.562 | -1.093 |
| PonA1 | -1.2 | -0.56 |
| EccD1_KO | 0.0 | -0.372 |
| EspI_KO | 0.211 | -0.322 |
| PE35_KO | 0.42 | 0.23 |
| PPE68_KO | -0.512 | -0.857 |
| glycerol2 | -1.073 | -0.115 |
| lignocerate | -0.22 | 0.838 |
| oleate | -1.086 | -0.373 |
| phosphatidylcholine | 0.224 | 0.496 |
| acetate | 0.507 | 2.545 |
| glucAc | 0.279 | 1.892 |
| Rv0950ko | 0.0 | 1.462 |
| Rv1096ko | -0.832 | 0.109 |
| Rv3684ko | -1.159 | 1.916 |
| delta_otsA_trehalose | -0.773 | -0.477 |