Top 10 genes with highest correlation to Rv0668/rpoC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3419c/gcp | (cc=0.704) | info on Rv3419c/gcp |
| Rv1239c/corA | (cc=0.6995) | info on Rv1239c/corA |
| Rv1925/fadD31 | (cc=0.683) | info on Rv1925/fadD31 |
| Rv3842c/glpQ1 | (cc=0.6618) | info on Rv3842c/glpQ1 |
| Rv2793c/truB | (cc=0.6459) | info on Rv2793c/truB |
| Rv0818/- | (cc=0.6446) | info on Rv0818/- |
| Rv3421c/- | (cc=0.6365) | info on Rv3421c/- |
| Rv2444c/rne | (cc=0.6251) | info on Rv2444c/rne |
| Rv0055/rpsR1 | (cc=0.6145) | info on Rv0055/rpsR1 |
| Rv3278c/- | (cc=0.6074) | info on Rv3278c/- |
Correlation of Rv0668/rpoC with Rv0818/-
Normalized LFCs for Rv0668/rpoC:
(description and provenance of datasets)
| Rv0668/rpoC | Rv0818/- | |
| Fe_supp_jason_reseq | 0.319 | -0.466 |
| low_pH_jason_reseq | 2.259 | 1.663 |
| NO_jason_reseq | 2.809 | 0.299 |
| B6_jason_reseq | 1.836 | 2.784 |
| MHCII_jason_reseq | -0.149 | 0.757 |
| Isoniazid02 | -0.108 | 2.415 |
| Rifampicin4 | 1.172 | -0.95 |
| Ethambutol3 | -0.626 | -0.032 |
| Meropenem3 | -0.182 | -3.061 |
| Vancomycin16 | -0.196 | -0.119 |
| Rv2680_day32 | 0.0 | 2.059 |
| H37Rv_KO_MarP | 0.203 | -1.637 |
| hypoxia_3wks | -1.934 | 0.367 |
| hypoxia_6wks | 1.293 | 2.08 |
| glycerol | 0.12 | 1.625 |
| cholesterol | 0.0 | 1.407 |
| AJ | 0.934 | 3.225 |
| Bibs02 | -0.371 | 0.135 |
| Bibs02c | 0.124 | 0.406 |
| BL6 | 1.017 | 2.235 |
| BL6a | 1.175 | 2.921 |
| BXD01 | 2.02 | 3.92 |
| BXD010 | 1.496 | 3.084 |
| BXD011 | 2.698 | 4.512 |
| BXD03 | 1.173 | 2.542 |
| BXD04 | 2.865 | 3.35 |
| BXD05 | 2.213 | 2.832 |
| BXD06 | 1.994 | 4.243 |
| BXD07 | 1.825 | 3.141 |
| BXD08 | 2.118 | 3.665 |
| BXD09 | 0.974 | 2.815 |
| CAST | 1.023 | 5.169 |
| CCcont | 0.663 | 1.299 |
| DS01 | 0.522 | 0.072 |
| DS02 | 0.129 | 0.682 |
| DS04 | 0.523 | 1.861 |
| DS0c | -0.137 | -0.281 |
| GP01 | -0.277 | 2.658 |
| GP02 | -0.303 | 1.581 |
| GP0c | 0.577 | 4.679 |
| NOD | -0.142 | 2.983 |
| NZO | 0.886 | 2.753 |
| PWK | 1.537 | 5.465 |
| H37Rv_KO_CtpC | -0.455 | 0.242 |
| H37Rv_KO_CtpD | 0.51 | 1.609 |
| H37Rv_KO_Rv1272 | 0.239 | 2.139 |
| H37Rv_KO_SugABC | 1.074 | 3.01 |
| H37Rv_KO_MbtN | 1.0 | 3.581 |
| Trans05 | 1.024 | 2.839 |
| macrophage_unactivated | -0.581 | -1.869 |
| IL1 | -1.406 | -2.711 |
| Rapamycin | -0.368 | -2.888 |
| Tcell | 0.362 | 0.267 |
| GMCSF | -1.046 | -2.627 |
| IFNab | -0.363 | 0.925 |
| IFNg | -0.673 | -4.311 |
| IFNg_GMCSF1 | -1.012 | -2.815 |
| Rv1432_day32 | 0.139 | 4.215 |
| Rv1565c_day32 | -0.588 | 1.248 |
| secA2_input | 0.445 | -0.106 |
| delta_Rv3594 | -0.061 | 0.312 |
| delta_Rv3717 | 1.233 | 2.38 |
| delta_Rv3811 | 0.559 | 1.152 |
| delta_Rv0954 | -1.562 | -0.456 |
| PonA1 | -1.2 | -0.777 |
| EccD1_KO | 0.0 | -2.582 |
| EspI_KO | 0.211 | -1.874 |
| PE35_KO | 0.42 | -0.143 |
| PPE68_KO | -0.512 | -1.037 |
| glycerol2 | -1.073 | -1.372 |
| lignocerate | -0.22 | -0.48 |
| oleate | -1.086 | -2.42 |
| phosphatidylcholine | 0.224 | -0.944 |
| acetate | 0.507 | -0.266 |
| glucAc | 0.279 | -0.073 |
| Rv0950ko | 0.0 | -1.894 |
| Rv1096ko | -0.832 | 0.012 |
| Rv3684ko | -1.159 | 0.57 |
| delta_otsA_trehalose | -0.773 | -0.379 |