Top 10 genes with highest correlation to Rv0668/rpoC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3419c/gcp | (cc=0.704) | info on Rv3419c/gcp |
| Rv1239c/corA | (cc=0.6995) | info on Rv1239c/corA |
| Rv1925/fadD31 | (cc=0.683) | info on Rv1925/fadD31 |
| Rv3842c/glpQ1 | (cc=0.6618) | info on Rv3842c/glpQ1 |
| Rv2793c/truB | (cc=0.6459) | info on Rv2793c/truB |
| Rv0818/- | (cc=0.6446) | info on Rv0818/- |
| Rv3421c/- | (cc=0.6365) | info on Rv3421c/- |
| Rv2444c/rne | (cc=0.6251) | info on Rv2444c/rne |
| Rv0055/rpsR1 | (cc=0.6145) | info on Rv0055/rpsR1 |
| Rv3278c/- | (cc=0.6074) | info on Rv3278c/- |
Correlation of Rv0668/rpoC with Rv1925/fadD31
Normalized LFCs for Rv0668/rpoC:
(description and provenance of datasets)
| Rv0668/rpoC | Rv1925/fadD31 | |
| Fe_supp_jason_reseq | 0.319 | 1.332 |
| low_pH_jason_reseq | 2.259 | 1.553 |
| NO_jason_reseq | 2.809 | 0.291 |
| B6_jason_reseq | 1.836 | 2.287 |
| MHCII_jason_reseq | -0.149 | 0.401 |
| Isoniazid02 | -0.108 | -0.943 |
| Rifampicin4 | 1.172 | -2.166 |
| Ethambutol3 | -0.626 | -0.22 |
| Meropenem3 | -0.182 | -0.709 |
| Vancomycin16 | -0.196 | -5.027 |
| Rv2680_day32 | 0.0 | 1.518 |
| H37Rv_KO_MarP | 0.203 | 0.454 |
| hypoxia_3wks | -1.934 | -3.246 |
| hypoxia_6wks | 1.293 | 1.942 |
| glycerol | 0.12 | 0.875 |
| cholesterol | 0.0 | 0.805 |
| AJ | 0.934 | 0.555 |
| Bibs02 | -0.371 | 0.619 |
| Bibs02c | 0.124 | 0.762 |
| BL6 | 1.017 | 2.426 |
| BL6a | 1.175 | 3.626 |
| BXD01 | 2.02 | 3.932 |
| BXD010 | 1.496 | 3.693 |
| BXD011 | 2.698 | 5.692 |
| BXD03 | 1.173 | 2.496 |
| BXD04 | 2.865 | 4.113 |
| BXD05 | 2.213 | 3.297 |
| BXD06 | 1.994 | 4.596 |
| BXD07 | 1.825 | 4.152 |
| BXD08 | 2.118 | 4.38 |
| BXD09 | 0.974 | 4.226 |
| CAST | 1.023 | 1.168 |
| CCcont | 0.663 | 0.689 |
| DS01 | 0.522 | 0.773 |
| DS02 | 0.129 | 0.803 |
| DS04 | 0.523 | 1.334 |
| DS0c | -0.137 | -0.016 |
| GP01 | -0.277 | 2.856 |
| GP02 | -0.303 | 3.646 |
| GP0c | 0.577 | 2.237 |
| NOD | -0.142 | -0.57 |
| NZO | 0.886 | 1.357 |
| PWK | 1.537 | 3.684 |
| H37Rv_KO_CtpC | -0.455 | 1.444 |
| H37Rv_KO_CtpD | 0.51 | -0.219 |
| H37Rv_KO_Rv1272 | 0.239 | 3.107 |
| H37Rv_KO_SugABC | 1.074 | 1.881 |
| H37Rv_KO_MbtN | 1.0 | 4.596 |
| Trans05 | 1.024 | 3.83 |
| macrophage_unactivated | -0.581 | -3.608 |
| IL1 | -1.406 | -0.217 |
| Rapamycin | -0.368 | -0.697 |
| Tcell | 0.362 | 0.375 |
| GMCSF | -1.046 | -3.601 |
| IFNab | -0.363 | 0.511 |
| IFNg | -0.673 | -0.569 |
| IFNg_GMCSF1 | -1.012 | -0.946 |
| Rv1432_day32 | 0.139 | 0.554 |
| Rv1565c_day32 | -0.588 | -3.911 |
| secA2_input | 0.445 | 0.009 |
| delta_Rv3594 | -0.061 | 0.422 |
| delta_Rv3717 | 1.233 | 2.923 |
| delta_Rv3811 | 0.559 | 1.325 |
| delta_Rv0954 | -1.562 | -1.804 |
| PonA1 | -1.2 | -2.193 |
| EccD1_KO | 0.0 | -2.273 |
| EspI_KO | 0.211 | -2.313 |
| PE35_KO | 0.42 | -2.654 |
| PPE68_KO | -0.512 | -2.4 |
| glycerol2 | -1.073 | 0.198 |
| lignocerate | -0.22 | -0.038 |
| oleate | -1.086 | -1.096 |
| phosphatidylcholine | 0.224 | 0.342 |
| acetate | 0.507 | -0.261 |
| glucAc | 0.279 | 0.266 |
| Rv0950ko | 0.0 | -1.248 |
| Rv1096ko | -0.832 | -1.553 |
| Rv3684ko | -1.159 | 0.527 |
| delta_otsA_trehalose | -0.773 | -0.149 |