Top 10 genes with highest correlation to Rv0668/rpoC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3419c/gcp | (cc=0.704) | info on Rv3419c/gcp |
| Rv1239c/corA | (cc=0.6995) | info on Rv1239c/corA |
| Rv1925/fadD31 | (cc=0.683) | info on Rv1925/fadD31 |
| Rv3842c/glpQ1 | (cc=0.6618) | info on Rv3842c/glpQ1 |
| Rv2793c/truB | (cc=0.6459) | info on Rv2793c/truB |
| Rv0818/- | (cc=0.6446) | info on Rv0818/- |
| Rv3421c/- | (cc=0.6365) | info on Rv3421c/- |
| Rv2444c/rne | (cc=0.6251) | info on Rv2444c/rne |
| Rv0055/rpsR1 | (cc=0.6145) | info on Rv0055/rpsR1 |
| Rv3278c/- | (cc=0.6074) | info on Rv3278c/- |
Correlation of Rv0668/rpoC with Rv3278c/-
Normalized LFCs for Rv0668/rpoC:
(description and provenance of datasets)
| Rv0668/rpoC | Rv3278c/- | |
| Fe_supp_jason_reseq | 0.319 | 1.468 |
| low_pH_jason_reseq | 2.259 | 0.462 |
| NO_jason_reseq | 2.809 | 0.307 |
| B6_jason_reseq | 1.836 | -0.034 |
| MHCII_jason_reseq | -0.149 | -0.278 |
| Isoniazid02 | -0.108 | 1.231 |
| Rifampicin4 | 1.172 | -0.417 |
| Ethambutol3 | -0.626 | -1.301 |
| Meropenem3 | -0.182 | 0.45 |
| Vancomycin16 | -0.196 | -0.117 |
| Rv2680_day32 | 0.0 | -0.947 |
| H37Rv_KO_MarP | 0.203 | -0.313 |
| hypoxia_3wks | -1.934 | -0.08 |
| hypoxia_6wks | 1.293 | -0.944 |
| glycerol | 0.12 | 0.089 |
| cholesterol | 0.0 | 0.435 |
| AJ | 0.934 | 2.054 |
| Bibs02 | -0.371 | -0.86 |
| Bibs02c | 0.124 | 0.405 |
| BL6 | 1.017 | 1.231 |
| BL6a | 1.175 | 1.83 |
| BXD01 | 2.02 | 1.482 |
| BXD010 | 1.496 | 2.103 |
| BXD011 | 2.698 | 1.654 |
| BXD03 | 1.173 | 2.582 |
| BXD04 | 2.865 | 2.541 |
| BXD05 | 2.213 | 2.114 |
| BXD06 | 1.994 | 2.357 |
| BXD07 | 1.825 | 1.526 |
| BXD08 | 2.118 | 1.779 |
| BXD09 | 0.974 | 1.464 |
| CAST | 1.023 | 1.351 |
| CCcont | 0.663 | 2.094 |
| DS01 | 0.522 | 0.814 |
| DS02 | 0.129 | 0.603 |
| DS04 | 0.523 | 1.221 |
| DS0c | -0.137 | 1.216 |
| GP01 | -0.277 | -0.537 |
| GP02 | -0.303 | 1.062 |
| GP0c | 0.577 | -0.642 |
| NOD | -0.142 | 1.808 |
| NZO | 0.886 | 1.519 |
| PWK | 1.537 | 3.493 |
| H37Rv_KO_CtpC | -0.455 | -0.385 |
| H37Rv_KO_CtpD | 0.51 | 0.074 |
| H37Rv_KO_Rv1272 | 0.239 | 1.648 |
| H37Rv_KO_SugABC | 1.074 | 0.555 |
| H37Rv_KO_MbtN | 1.0 | 0.605 |
| Trans05 | 1.024 | 1.446 |
| macrophage_unactivated | -0.581 | -0.426 |
| IL1 | -1.406 | -1.883 |
| Rapamycin | -0.368 | -1.544 |
| Tcell | 0.362 | -0.544 |
| GMCSF | -1.046 | -0.943 |
| IFNab | -0.363 | -0.928 |
| IFNg | -0.673 | 0.182 |
| IFNg_GMCSF1 | -1.012 | 0.848 |
| Rv1432_day32 | 0.139 | 0.08 |
| Rv1565c_day32 | -0.588 | -0.218 |
| secA2_input | 0.445 | -0.229 |
| delta_Rv3594 | -0.061 | -0.714 |
| delta_Rv3717 | 1.233 | -0.904 |
| delta_Rv3811 | 0.559 | -0.998 |
| delta_Rv0954 | -1.562 | -1.974 |
| PonA1 | -1.2 | -1.813 |
| EccD1_KO | 0.0 | -0.332 |
| EspI_KO | 0.211 | -0.154 |
| PE35_KO | 0.42 | -0.239 |
| PPE68_KO | -0.512 | -0.262 |
| glycerol2 | -1.073 | -0.343 |
| lignocerate | -0.22 | 1.15 |
| oleate | -1.086 | -1.109 |
| phosphatidylcholine | 0.224 | 0.64 |
| acetate | 0.507 | 0.602 |
| glucAc | 0.279 | 0.61 |
| Rv0950ko | 0.0 | -0.256 |
| Rv1096ko | -0.832 | 0.0 |
| Rv3684ko | -1.159 | 0.059 |
| delta_otsA_trehalose | -0.773 | -0.945 |