Top 10 genes with highest correlation to Rv0655/mkl:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3723/- | (cc=0.8516) | info on Rv3723/- |
| Rv0199/- | (cc=0.8138) | info on Rv0199/- |
| Rv3544c/fadE28 | (cc=0.7422) | info on Rv3544c/fadE28 |
| Rv3496c/mce4D | (cc=0.7295) | info on Rv3496c/mce4D |
| Rv3484/cpsA | (cc=0.7226) | info on Rv3484/cpsA |
| Rv3569c/hsaD | (cc=0.7199) | info on Rv3569c/hsaD |
| Rv3871/eccCb1 | (cc=0.7184) | info on Rv3871/eccCb1 |
| Rv0200/- | (cc=0.7126) | info on Rv0200/- |
| Rv1235/lpqY | (cc=0.7006) | info on Rv1235/lpqY |
| Rv3542c/- | (cc=0.6992) | info on Rv3542c/- |
Correlation of Rv0655/mkl with Rv3544c/fadE28
Normalized LFCs for Rv0655/mkl:
(description and provenance of datasets)
| Rv0655/mkl | Rv3544c/fadE28 | |
| Fe_supp_jason_reseq | -0.355 | -0.39 |
| low_pH_jason_reseq | 0.03 | -0.234 |
| NO_jason_reseq | 2.481 | 0.205 |
| B6_jason_reseq | -1.246 | -2.959 |
| MHCII_jason_reseq | -1.981 | -2.606 |
| Isoniazid02 | -0.429 | 0.044 |
| Rifampicin4 | 0.634 | 0.495 |
| Ethambutol3 | -0.857 | -0.036 |
| Meropenem3 | 0.377 | -0.359 |
| Vancomycin16 | 1.366 | 0.692 |
| Rv2680_day32 | -1.955 | -0.725 |
| H37Rv_KO_MarP | 0.948 | 0.442 |
| hypoxia_3wks | 2.44 | 0.475 |
| hypoxia_6wks | 2.144 | 0.267 |
| glycerol | -0.578 | 1.202 |
| cholesterol | -2.106 | -3.408 |
| AJ | -3.419 | -5.459 |
| Bibs02 | -2.73 | -4.302 |
| Bibs02c | -1.784 | -3.895 |
| BL6 | -1.039 | -2.705 |
| BL6a | -1.964 | -3.821 |
| BXD01 | -2.026 | -1.93 |
| BXD010 | -1.254 | -1.787 |
| BXD011 | -1.248 | -2.143 |
| BXD03 | -1.682 | -2.202 |
| BXD04 | -0.902 | -1.184 |
| BXD05 | -1.881 | -1.621 |
| BXD06 | -2.291 | -2.774 |
| BXD07 | -1.306 | -0.872 |
| BXD08 | -1.741 | -1.388 |
| BXD09 | -1.661 | -2.616 |
| CAST | -3.394 | -5.189 |
| CCcont | -0.752 | 0.243 |
| DS01 | -3.995 | -5.557 |
| DS02 | -2.185 | -5.117 |
| DS04 | -2.641 | -3.373 |
| DS0c | -4.563 | -4.69 |
| GP01 | -0.069 | -1.976 |
| GP02 | -1.78 | -1.665 |
| GP0c | -0.52 | -0.2 |
| NOD | -2.314 | -4.182 |
| NZO | -2.358 | -4.693 |
| PWK | -2.568 | -4.615 |
| H37Rv_KO_CtpC | -1.532 | -2.824 |
| H37Rv_KO_CtpD | -0.609 | -2.131 |
| H37Rv_KO_Rv1272 | -1.689 | -2.028 |
| H37Rv_KO_SugABC | 1.066 | 0.929 |
| H37Rv_KO_MbtN | 0.545 | 0.27 |
| Trans05 | 0.091 | -2.128 |
| macrophage_unactivated | -2.304 | -0.735 |
| IL1 | 1.204 | 0.0 |
| Rapamycin | 0.924 | 0.957 |
| Tcell | -1.919 | -3.314 |
| GMCSF | -0.686 | -0.18 |
| IFNab | -0.375 | 2.576 |
| IFNg | -0.89 | -0.323 |
| IFNg_GMCSF1 | -0.167 | -0.795 |
| Rv1432_day32 | -1.7 | -4.12 |
| Rv1565c_day32 | -2.766 | -2.426 |
| secA2_input | 0.283 | 1.204 |
| delta_Rv3594 | -0.41 | 1.358 |
| delta_Rv3717 | 0.008 | 0.964 |
| delta_Rv3811 | -0.33 | 1.451 |
| delta_Rv0954 | -0.336 | 1.18 |
| PonA1 | 0.007 | 2.063 |
| EccD1_KO | 0.513 | -0.852 |
| EspI_KO | 0.702 | -0.057 |
| PE35_KO | -0.163 | 0.642 |
| PPE68_KO | -0.202 | -0.128 |
| glycerol2 | -2.294 | 0.514 |
| lignocerate | -2.4 | -0.246 |
| oleate | -0.208 | 0.335 |
| phosphatidylcholine | -1.737 | -0.038 |
| acetate | -0.74 | -0.758 |
| glucAc | -0.861 | -0.612 |
| Rv0950ko | -0.404 | 0.874 |
| Rv1096ko | 0.368 | 0.458 |
| Rv3684ko | 0.422 | 0.691 |
| delta_otsA_trehalose | -0.57 | 0.993 |