Top 10 genes with highest correlation to Rv0655/mkl:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3723/- | (cc=0.8516) | info on Rv3723/- |
| Rv0199/- | (cc=0.8138) | info on Rv0199/- |
| Rv3544c/fadE28 | (cc=0.7422) | info on Rv3544c/fadE28 |
| Rv3496c/mce4D | (cc=0.7295) | info on Rv3496c/mce4D |
| Rv3484/cpsA | (cc=0.7226) | info on Rv3484/cpsA |
| Rv3569c/hsaD | (cc=0.7199) | info on Rv3569c/hsaD |
| Rv3871/eccCb1 | (cc=0.7184) | info on Rv3871/eccCb1 |
| Rv0200/- | (cc=0.7126) | info on Rv0200/- |
| Rv1235/lpqY | (cc=0.7006) | info on Rv1235/lpqY |
| Rv3542c/- | (cc=0.6992) | info on Rv3542c/- |
Correlation of Rv0655/mkl with Rv3484/cpsA
Normalized LFCs for Rv0655/mkl:
(description and provenance of datasets)
| Rv0655/mkl | Rv3484/cpsA | |
| Fe_supp_jason_reseq | -0.355 | -1.301 |
| low_pH_jason_reseq | 0.03 | -1.318 |
| NO_jason_reseq | 2.481 | 0.95 |
| B6_jason_reseq | -1.246 | -5.113 |
| MHCII_jason_reseq | -1.981 | -3.589 |
| Isoniazid02 | -0.429 | 1.024 |
| Rifampicin4 | 0.634 | -4.021 |
| Ethambutol3 | -0.857 | 0.911 |
| Meropenem3 | 0.377 | 1.791 |
| Vancomycin16 | 1.366 | 0.332 |
| Rv2680_day32 | -1.955 | -3.023 |
| H37Rv_KO_MarP | 0.948 | -2.091 |
| hypoxia_3wks | 2.44 | 5.957 |
| hypoxia_6wks | 2.144 | 6.0 |
| glycerol | -0.578 | -5.475 |
| cholesterol | -2.106 | -1.067 |
| AJ | -3.419 | -6.0 |
| Bibs02 | -2.73 | -3.786 |
| Bibs02c | -1.784 | -6.0 |
| BL6 | -1.039 | -2.704 |
| BL6a | -1.964 | -4.585 |
| BXD01 | -2.026 | -3.759 |
| BXD010 | -1.254 | -3.373 |
| BXD011 | -1.248 | -2.753 |
| BXD03 | -1.682 | -2.307 |
| BXD04 | -0.902 | -3.084 |
| BXD05 | -1.881 | -2.786 |
| BXD06 | -2.291 | -3.852 |
| BXD07 | -1.306 | -3.754 |
| BXD08 | -1.741 | -3.838 |
| BXD09 | -1.661 | -4.195 |
| CAST | -3.394 | -5.899 |
| CCcont | -0.752 | 0.495 |
| DS01 | -3.995 | -6.0 |
| DS02 | -2.185 | -6.0 |
| DS04 | -2.641 | -3.433 |
| DS0c | -4.563 | -5.556 |
| GP01 | -0.069 | -1.814 |
| GP02 | -1.78 | -1.973 |
| GP0c | -0.52 | 1.453 |
| NOD | -2.314 | -5.199 |
| NZO | -2.358 | -5.757 |
| PWK | -2.568 | -5.482 |
| H37Rv_KO_CtpC | -1.532 | -1.429 |
| H37Rv_KO_CtpD | -0.609 | -2.123 |
| H37Rv_KO_Rv1272 | -1.689 | -3.428 |
| H37Rv_KO_SugABC | 1.066 | -0.988 |
| H37Rv_KO_MbtN | 0.545 | 3.329 |
| Trans05 | 0.091 | -2.078 |
| macrophage_unactivated | -2.304 | -2.809 |
| IL1 | 1.204 | -0.486 |
| Rapamycin | 0.924 | -1.648 |
| Tcell | -1.919 | -1.326 |
| GMCSF | -0.686 | -0.364 |
| IFNab | -0.375 | 0.674 |
| IFNg | -0.89 | -0.513 |
| IFNg_GMCSF1 | -0.167 | -1.103 |
| Rv1432_day32 | -1.7 | -3.159 |
| Rv1565c_day32 | -2.766 | -3.27 |
| secA2_input | 0.283 | -0.56 |
| delta_Rv3594 | -0.41 | 0.109 |
| delta_Rv3717 | 0.008 | 1.111 |
| delta_Rv3811 | -0.33 | 0.297 |
| delta_Rv0954 | -0.336 | -1.443 |
| PonA1 | 0.007 | -3.094 |
| EccD1_KO | 0.513 | -0.283 |
| EspI_KO | 0.702 | -0.827 |
| PE35_KO | -0.163 | -1.175 |
| PPE68_KO | -0.202 | -1.443 |
| glycerol2 | -2.294 | -1.188 |
| lignocerate | -2.4 | -1.033 |
| oleate | -0.208 | -1.202 |
| phosphatidylcholine | -1.737 | -1.188 |
| acetate | -0.74 | -0.136 |
| glucAc | -0.861 | 0.081 |
| Rv0950ko | -0.404 | -0.344 |
| Rv1096ko | 0.368 | -0.745 |
| Rv3684ko | 0.422 | 1.238 |
| delta_otsA_trehalose | -0.57 | 1.732 |