Top 10 genes with highest correlation to Rv0655/mkl:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3723/- | (cc=0.8516) | info on Rv3723/- |
| Rv0199/- | (cc=0.8138) | info on Rv0199/- |
| Rv3544c/fadE28 | (cc=0.7422) | info on Rv3544c/fadE28 |
| Rv3496c/mce4D | (cc=0.7295) | info on Rv3496c/mce4D |
| Rv3484/cpsA | (cc=0.7226) | info on Rv3484/cpsA |
| Rv3569c/hsaD | (cc=0.7199) | info on Rv3569c/hsaD |
| Rv3871/eccCb1 | (cc=0.7184) | info on Rv3871/eccCb1 |
| Rv0200/- | (cc=0.7126) | info on Rv0200/- |
| Rv1235/lpqY | (cc=0.7006) | info on Rv1235/lpqY |
| Rv3542c/- | (cc=0.6992) | info on Rv3542c/- |
Correlation of Rv0655/mkl with Rv3496c/mce4D
Normalized LFCs for Rv0655/mkl:
(description and provenance of datasets)
| Rv0655/mkl | Rv3496c/mce4D | |
| Fe_supp_jason_reseq | -0.355 | 0.036 |
| low_pH_jason_reseq | 0.03 | -0.773 |
| NO_jason_reseq | 2.481 | 0.404 |
| B6_jason_reseq | -1.246 | -1.98 |
| MHCII_jason_reseq | -1.981 | -2.258 |
| Isoniazid02 | -0.429 | 0.045 |
| Rifampicin4 | 0.634 | 0.225 |
| Ethambutol3 | -0.857 | 0.761 |
| Meropenem3 | 0.377 | -1.18 |
| Vancomycin16 | 1.366 | 0.446 |
| Rv2680_day32 | -1.955 | -2.31 |
| H37Rv_KO_MarP | 0.948 | 0.384 |
| hypoxia_3wks | 2.44 | 0.247 |
| hypoxia_6wks | 2.144 | 0.347 |
| glycerol | -0.578 | -0.243 |
| cholesterol | -2.106 | -3.912 |
| AJ | -3.419 | -3.652 |
| Bibs02 | -2.73 | -0.766 |
| Bibs02c | -1.784 | -1.02 |
| BL6 | -1.039 | -1.607 |
| BL6a | -1.964 | -1.435 |
| BXD01 | -2.026 | -1.196 |
| BXD010 | -1.254 | -0.499 |
| BXD011 | -1.248 | -1.314 |
| BXD03 | -1.682 | -0.769 |
| BXD04 | -0.902 | -1.792 |
| BXD05 | -1.881 | -0.949 |
| BXD06 | -2.291 | -1.076 |
| BXD07 | -1.306 | -0.898 |
| BXD08 | -1.741 | -1.059 |
| BXD09 | -1.661 | -1.258 |
| CAST | -3.394 | -2.81 |
| CCcont | -0.752 | -0.439 |
| DS01 | -3.995 | -2.881 |
| DS02 | -2.185 | -1.824 |
| DS04 | -2.641 | -2.773 |
| DS0c | -4.563 | -2.073 |
| GP01 | -0.069 | -0.421 |
| GP02 | -1.78 | -0.611 |
| GP0c | -0.52 | -0.039 |
| NOD | -2.314 | -2.602 |
| NZO | -2.358 | -2.465 |
| PWK | -2.568 | -2.693 |
| H37Rv_KO_CtpC | -1.532 | -1.81 |
| H37Rv_KO_CtpD | -0.609 | -0.753 |
| H37Rv_KO_Rv1272 | -1.689 | -0.326 |
| H37Rv_KO_SugABC | 1.066 | 0.223 |
| H37Rv_KO_MbtN | 0.545 | 1.117 |
| Trans05 | 0.091 | -0.627 |
| macrophage_unactivated | -2.304 | -1.417 |
| IL1 | 1.204 | 1.969 |
| Rapamycin | 0.924 | 1.608 |
| Tcell | -1.919 | -0.375 |
| GMCSF | -0.686 | -1.798 |
| IFNab | -0.375 | -1.726 |
| IFNg | -0.89 | -0.959 |
| IFNg_GMCSF1 | -0.167 | -1.694 |
| Rv1432_day32 | -1.7 | -0.941 |
| Rv1565c_day32 | -2.766 | -2.286 |
| secA2_input | 0.283 | 0.014 |
| delta_Rv3594 | -0.41 | -0.5 |
| delta_Rv3717 | 0.008 | -0.242 |
| delta_Rv3811 | -0.33 | -0.449 |
| delta_Rv0954 | -0.336 | -0.017 |
| PonA1 | 0.007 | -0.07 |
| EccD1_KO | 0.513 | 0.516 |
| EspI_KO | 0.702 | 0.322 |
| PE35_KO | -0.163 | -0.403 |
| PPE68_KO | -0.202 | 0.301 |
| glycerol2 | -2.294 | -0.729 |
| lignocerate | -2.4 | 0.337 |
| oleate | -0.208 | 0.7 |
| phosphatidylcholine | -1.737 | -0.535 |
| acetate | -0.74 | -0.175 |
| glucAc | -0.861 | -0.569 |
| Rv0950ko | -0.404 | 0.642 |
| Rv1096ko | 0.368 | 1.33 |
| Rv3684ko | 0.422 | 1.14 |
| delta_otsA_trehalose | -0.57 | 0.795 |