Top 10 genes with highest correlation to Rv0599c/vapB27:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3655c/- | (cc=0.504) | info on Rv3655c/- |
| Rv1180/pks3 | (cc=0.4854) | info on Rv1180/pks3 |
| Rv1735c/- | (cc=0.4812) | info on Rv1735c/- |
| Rv1843c/guaB1 | (cc=0.4801) | info on Rv1843c/guaB1 |
| Rv2597/- | (cc=0.4547) | info on Rv2597/- |
| Rv3328c/sigJ | (cc=0.4457) | info on Rv3328c/sigJ |
| Rv0578c/PE_PGRS7 | (cc=0.4437) | info on Rv0578c/PE_PGRS7 |
| Rv0679c/- | (cc=0.4422) | info on Rv0679c/- |
| Rv0233/nrdB | (cc=0.4418) | info on Rv0233/nrdB |
| Rv2559c/- | (cc=0.438) | info on Rv2559c/- |
Correlation of Rv0599c/vapB27 with Rv3655c/-
Normalized LFCs for Rv0599c/vapB27:
(description and provenance of datasets)
| Rv0599c/vapB27 | Rv3655c/- | |
| Fe_supp_jason_reseq | 0.0 | 0.425 |
| low_pH_jason_reseq | -0.146 | -1.049 |
| NO_jason_reseq | 0.32 | -0.604 |
| B6_jason_reseq | 0.3 | 1.205 |
| MHCII_jason_reseq | 1.535 | 2.276 |
| Isoniazid02 | -0.489 | 0.335 |
| Rifampicin4 | -0.485 | 0.382 |
| Ethambutol3 | -0.27 | 5.673 |
| Meropenem3 | -0.403 | 0.092 |
| Vancomycin16 | -0.589 | 0.061 |
| Rv2680_day32 | -0.906 | -1.416 |
| H37Rv_KO_MarP | -0.089 | -0.591 |
| hypoxia_3wks | -0.614 | -1.033 |
| hypoxia_6wks | -1.157 | -0.804 |
| glycerol | -0.742 | -0.284 |
| cholesterol | -0.67 | -0.588 |
| AJ | 0.361 | 0.407 |
| Bibs02 | -0.072 | 1.009 |
| Bibs02c | 1.166 | 1.447 |
| BL6 | -2.735 | -3.974 |
| BL6a | 0.241 | -0.238 |
| BXD01 | -0.502 | -1.472 |
| BXD010 | -1.375 | -1.256 |
| BXD011 | -1.279 | -0.233 |
| BXD03 | -1.146 | -0.862 |
| BXD04 | 0.233 | -1.781 |
| BXD05 | 0.253 | -0.792 |
| BXD06 | -1.585 | -1.621 |
| BXD07 | -0.757 | -0.906 |
| BXD08 | -1.127 | -1.735 |
| BXD09 | -0.738 | -0.956 |
| CAST | -0.492 | -0.36 |
| CCcont | -1.222 | -3.528 |
| DS01 | -0.741 | 1.646 |
| DS02 | 1.144 | 1.742 |
| DS04 | 0.049 | 0.625 |
| DS0c | -1.656 | 1.009 |
| GP01 | -1.393 | -1.353 |
| GP02 | -0.705 | -1.112 |
| GP0c | 0.066 | -2.31 |
| NOD | 0.981 | -0.316 |
| NZO | 0.397 | 0.036 |
| PWK | 0.146 | 0.753 |
| H37Rv_KO_CtpC | -1.24 | -1.221 |
| H37Rv_KO_CtpD | 0.696 | 0.864 |
| H37Rv_KO_Rv1272 | 0.188 | -0.353 |
| H37Rv_KO_SugABC | -1.977 | -1.391 |
| H37Rv_KO_MbtN | -1.356 | -1.688 |
| Trans05 | 0.017 | -0.935 |
| macrophage_unactivated | -1.398 | -0.451 |
| IL1 | -2.296 | -1.258 |
| Rapamycin | 0.083 | -1.415 |
| Tcell | -1.818 | -0.821 |
| GMCSF | -2.712 | -0.539 |
| IFNab | -1.119 | -0.254 |
| IFNg | -1.384 | -0.762 |
| IFNg_GMCSF1 | -0.742 | 0.487 |
| Rv1432_day32 | 0.0 | 0.484 |
| Rv1565c_day32 | 1.91 | -0.122 |
| secA2_input | 0.518 | 0.999 |
| delta_Rv3594 | 0.031 | 0.08 |
| delta_Rv3717 | -0.878 | -0.405 |
| delta_Rv3811 | 0.402 | -0.033 |
| delta_Rv0954 | -0.461 | -0.114 |
| PonA1 | -1.481 | -2.026 |
| EccD1_KO | 0.921 | 0.0 |
| EspI_KO | -3.157 | -1.252 |
| PE35_KO | 0.076 | 0.315 |
| PPE68_KO | 0.163 | 0.406 |
| glycerol2 | -0.565 | -1.739 |
| lignocerate | -1.13 | -1.913 |
| oleate | -0.503 | -0.413 |
| phosphatidylcholine | -0.859 | -1.48 |
| acetate | -2.929 | -0.916 |
| glucAc | -1.283 | -2.888 |
| Rv0950ko | 0.163 | 2.234 |
| Rv1096ko | 0.398 | 2.702 |
| Rv3684ko | 0.432 | 2.869 |
| delta_otsA_trehalose | 0.107 | -0.27 |