Top 10 genes with highest correlation to Rv0599c/vapB27:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3655c/- | (cc=0.504) | info on Rv3655c/- |
| Rv1180/pks3 | (cc=0.4854) | info on Rv1180/pks3 |
| Rv1735c/- | (cc=0.4812) | info on Rv1735c/- |
| Rv1843c/guaB1 | (cc=0.4801) | info on Rv1843c/guaB1 |
| Rv2597/- | (cc=0.4547) | info on Rv2597/- |
| Rv3328c/sigJ | (cc=0.4457) | info on Rv3328c/sigJ |
| Rv0578c/PE_PGRS7 | (cc=0.4437) | info on Rv0578c/PE_PGRS7 |
| Rv0679c/- | (cc=0.4422) | info on Rv0679c/- |
| Rv0233/nrdB | (cc=0.4418) | info on Rv0233/nrdB |
| Rv2559c/- | (cc=0.438) | info on Rv2559c/- |
Correlation of Rv0599c/vapB27 with Rv0233/nrdB
Normalized LFCs for Rv0599c/vapB27:
(description and provenance of datasets)
| Rv0599c/vapB27 | Rv0233/nrdB | |
| Fe_supp_jason_reseq | 0.0 | 0.2 |
| low_pH_jason_reseq | -0.146 | -0.095 |
| NO_jason_reseq | 0.32 | -0.131 |
| B6_jason_reseq | 0.3 | 0.854 |
| MHCII_jason_reseq | 1.535 | 1.421 |
| Isoniazid02 | -0.489 | 0.322 |
| Rifampicin4 | -0.485 | -0.192 |
| Ethambutol3 | -0.27 | 0.154 |
| Meropenem3 | -0.403 | 0.291 |
| Vancomycin16 | -0.589 | -0.443 |
| Rv2680_day32 | -0.906 | 0.614 |
| H37Rv_KO_MarP | -0.089 | 0.167 |
| hypoxia_3wks | -0.614 | -0.159 |
| hypoxia_6wks | -1.157 | 0.192 |
| glycerol | -0.742 | -0.973 |
| cholesterol | -0.67 | -0.39 |
| AJ | 0.361 | 0.316 |
| Bibs02 | -0.072 | 0.891 |
| Bibs02c | 1.166 | 0.543 |
| BL6 | -2.735 | -1.416 |
| BL6a | 0.241 | -0.575 |
| BXD01 | -0.502 | -0.696 |
| BXD010 | -1.375 | -0.537 |
| BXD011 | -1.279 | -0.693 |
| BXD03 | -1.146 | -1.509 |
| BXD04 | 0.233 | -0.539 |
| BXD05 | 0.253 | -0.41 |
| BXD06 | -1.585 | -0.887 |
| BXD07 | -0.757 | -1.157 |
| BXD08 | -1.127 | -0.354 |
| BXD09 | -0.738 | -0.919 |
| CAST | -0.492 | -0.038 |
| CCcont | -1.222 | -1.564 |
| DS01 | -0.741 | 1.025 |
| DS02 | 1.144 | 0.748 |
| DS04 | 0.049 | 0.933 |
| DS0c | -1.656 | 0.548 |
| GP01 | -1.393 | -0.911 |
| GP02 | -0.705 | -0.359 |
| GP0c | 0.066 | -0.382 |
| NOD | 0.981 | 0.605 |
| NZO | 0.397 | 0.12 |
| PWK | 0.146 | -0.242 |
| H37Rv_KO_CtpC | -1.24 | -1.19 |
| H37Rv_KO_CtpD | 0.696 | -0.803 |
| H37Rv_KO_Rv1272 | 0.188 | -0.626 |
| H37Rv_KO_SugABC | -1.977 | -0.316 |
| H37Rv_KO_MbtN | -1.356 | -0.755 |
| Trans05 | 0.017 | -0.13 |
| macrophage_unactivated | -1.398 | -1.083 |
| IL1 | -2.296 | -0.193 |
| Rapamycin | 0.083 | -0.786 |
| Tcell | -1.818 | -0.046 |
| GMCSF | -2.712 | 0.459 |
| IFNab | -1.119 | -0.478 |
| IFNg | -1.384 | 0.38 |
| IFNg_GMCSF1 | -0.742 | -0.396 |
| Rv1432_day32 | 0.0 | 0.042 |
| Rv1565c_day32 | 1.91 | 0.963 |
| secA2_input | 0.518 | 0.106 |
| delta_Rv3594 | 0.031 | -0.399 |
| delta_Rv3717 | -0.878 | -0.766 |
| delta_Rv3811 | 0.402 | -0.589 |
| delta_Rv0954 | -0.461 | -0.252 |
| PonA1 | -1.481 | -0.066 |
| EccD1_KO | 0.921 | -0.286 |
| EspI_KO | -3.157 | -0.368 |
| PE35_KO | 0.076 | -1.041 |
| PPE68_KO | 0.163 | -0.483 |
| glycerol2 | -0.565 | -0.911 |
| lignocerate | -1.13 | -0.609 |
| oleate | -0.503 | -0.404 |
| phosphatidylcholine | -0.859 | -0.598 |
| acetate | -2.929 | -1.107 |
| glucAc | -1.283 | -1.029 |
| Rv0950ko | 0.163 | 0.308 |
| Rv1096ko | 0.398 | 0.805 |
| Rv3684ko | 0.432 | 0.259 |
| delta_otsA_trehalose | 0.107 | 0.437 |