Top 10 genes with highest correlation to Rv0599c/vapB27:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3655c/- | (cc=0.504) | info on Rv3655c/- |
| Rv1180/pks3 | (cc=0.4854) | info on Rv1180/pks3 |
| Rv1735c/- | (cc=0.4812) | info on Rv1735c/- |
| Rv1843c/guaB1 | (cc=0.4801) | info on Rv1843c/guaB1 |
| Rv2597/- | (cc=0.4547) | info on Rv2597/- |
| Rv3328c/sigJ | (cc=0.4457) | info on Rv3328c/sigJ |
| Rv0578c/PE_PGRS7 | (cc=0.4437) | info on Rv0578c/PE_PGRS7 |
| Rv0679c/- | (cc=0.4422) | info on Rv0679c/- |
| Rv0233/nrdB | (cc=0.4418) | info on Rv0233/nrdB |
| Rv2559c/- | (cc=0.438) | info on Rv2559c/- |
Correlation of Rv0599c/vapB27 with Rv0679c/-
Normalized LFCs for Rv0599c/vapB27:
(description and provenance of datasets)
| Rv0599c/vapB27 | Rv0679c/- | |
| Fe_supp_jason_reseq | 0.0 | -0.134 |
| low_pH_jason_reseq | -0.146 | -0.524 |
| NO_jason_reseq | 0.32 | 0.21 |
| B6_jason_reseq | 0.3 | 0.755 |
| MHCII_jason_reseq | 1.535 | 0.913 |
| Isoniazid02 | -0.489 | 0.035 |
| Rifampicin4 | -0.485 | 0.127 |
| Ethambutol3 | -0.27 | 0.631 |
| Meropenem3 | -0.403 | 0.54 |
| Vancomycin16 | -0.589 | 0.0 |
| Rv2680_day32 | -0.906 | 0.175 |
| H37Rv_KO_MarP | -0.089 | -0.25 |
| hypoxia_3wks | -0.614 | 0.782 |
| hypoxia_6wks | -1.157 | 0.015 |
| glycerol | -0.742 | -1.498 |
| cholesterol | -0.67 | 0.136 |
| AJ | 0.361 | 0.802 |
| Bibs02 | -0.072 | 0.67 |
| Bibs02c | 1.166 | 0.485 |
| BL6 | -2.735 | -1.117 |
| BL6a | 0.241 | 0.237 |
| BXD01 | -0.502 | 0.101 |
| BXD010 | -1.375 | -1.5 |
| BXD011 | -1.279 | -1.104 |
| BXD03 | -1.146 | -2.282 |
| BXD04 | 0.233 | -0.643 |
| BXD05 | 0.253 | -0.088 |
| BXD06 | -1.585 | -1.054 |
| BXD07 | -0.757 | -0.311 |
| BXD08 | -1.127 | 0.18 |
| BXD09 | -0.738 | -0.498 |
| CAST | -0.492 | -0.237 |
| CCcont | -1.222 | -1.83 |
| DS01 | -0.741 | -0.098 |
| DS02 | 1.144 | -0.411 |
| DS04 | 0.049 | -1.244 |
| DS0c | -1.656 | -1.171 |
| GP01 | -1.393 | -2.641 |
| GP02 | -0.705 | -1.271 |
| GP0c | 0.066 | -1.721 |
| NOD | 0.981 | -1.323 |
| NZO | 0.397 | 0.614 |
| PWK | 0.146 | 0.352 |
| H37Rv_KO_CtpC | -1.24 | 0.332 |
| H37Rv_KO_CtpD | 0.696 | -0.511 |
| H37Rv_KO_Rv1272 | 0.188 | -1.603 |
| H37Rv_KO_SugABC | -1.977 | 0.547 |
| H37Rv_KO_MbtN | -1.356 | -0.814 |
| Trans05 | 0.017 | -0.284 |
| macrophage_unactivated | -1.398 | -1.203 |
| IL1 | -2.296 | -2.361 |
| Rapamycin | 0.083 | -1.455 |
| Tcell | -1.818 | -0.645 |
| GMCSF | -2.712 | -1.085 |
| IFNab | -1.119 | -2.851 |
| IFNg | -1.384 | -0.746 |
| IFNg_GMCSF1 | -0.742 | -1.103 |
| Rv1432_day32 | 0.0 | 0.343 |
| Rv1565c_day32 | 1.91 | 0.0 |
| secA2_input | 0.518 | 0.059 |
| delta_Rv3594 | 0.031 | -0.829 |
| delta_Rv3717 | -0.878 | -1.107 |
| delta_Rv3811 | 0.402 | -1.257 |
| delta_Rv0954 | -0.461 | -2.14 |
| PonA1 | -1.481 | -2.053 |
| EccD1_KO | 0.921 | 0.684 |
| EspI_KO | -3.157 | -1.075 |
| PE35_KO | 0.076 | -0.117 |
| PPE68_KO | 0.163 | -0.355 |
| glycerol2 | -0.565 | 0.053 |
| lignocerate | -1.13 | -1.003 |
| oleate | -0.503 | 0.7 |
| phosphatidylcholine | -0.859 | 0.136 |
| acetate | -2.929 | -1.234 |
| glucAc | -1.283 | -3.343 |
| Rv0950ko | 0.163 | -0.036 |
| Rv1096ko | 0.398 | 0.428 |
| Rv3684ko | 0.432 | 0.314 |
| delta_otsA_trehalose | 0.107 | 0.481 |