Top 10 genes with highest correlation to Rv0581/vapB26:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1773c/- | (cc=0.5168) | info on Rv1773c/- |
| Rv2978c/- | (cc=0.4892) | info on Rv2978c/- |
| Rv0427c/xthA | (cc=0.4738) | info on Rv0427c/xthA |
| Rv2911/dacB2 | (cc=0.4706) | info on Rv2911/dacB2 |
| Rv3387/- | (cc=0.4672) | info on Rv3387/- |
| Rv0865/mog | (cc=0.4666) | info on Rv0865/mog |
| Rv2537c/aroD | (cc=0.4615) | info on Rv2537c/aroD |
| Rv0817c/- | (cc=0.4532) | info on Rv0817c/- |
| Rv2484c/- | (cc=0.4525) | info on Rv2484c/- |
| Rv2250A/- | (cc=0.4446) | info on Rv2250A/- |
Correlation of Rv0581/vapB26 with Rv3387/-
Normalized LFCs for Rv0581/vapB26:
(description and provenance of datasets)
| Rv0581/vapB26 | Rv3387/- | |
| Fe_supp_jason_reseq | -1.017 | -0.33 |
| low_pH_jason_reseq | -1.952 | -1.016 |
| NO_jason_reseq | 0.344 | -1.289 |
| B6_jason_reseq | -1.021 | -0.719 |
| MHCII_jason_reseq | -1.845 | -1.076 |
| Isoniazid02 | 0.457 | -0.157 |
| Rifampicin4 | 0.907 | 1.427 |
| Ethambutol3 | 0.716 | 0.068 |
| Meropenem3 | 0.643 | -0.093 |
| Vancomycin16 | 0.889 | 0.406 |
| Rv2680_day32 | 1.836 | 0.942 |
| H37Rv_KO_MarP | 0.025 | 0.95 |
| hypoxia_3wks | 0.75 | 0.191 |
| hypoxia_6wks | 1.084 | 0.841 |
| glycerol | -1.068 | -1.107 |
| cholesterol | -0.322 | -0.959 |
| AJ | -0.034 | -0.575 |
| Bibs02 | -2.073 | 0.46 |
| Bibs02c | 1.05 | 0.561 |
| BL6 | -0.603 | 0.111 |
| BL6a | 1.319 | 0.201 |
| BXD01 | -0.306 | -0.334 |
| BXD010 | -0.339 | 0.263 |
| BXD011 | -0.239 | -0.216 |
| BXD03 | 0.92 | -0.588 |
| BXD04 | -0.275 | 0.262 |
| BXD05 | -0.39 | 0.038 |
| BXD06 | -0.438 | -0.039 |
| BXD07 | 0.645 | 0.697 |
| BXD08 | 0.217 | 0.274 |
| BXD09 | -0.313 | -0.01 |
| CAST | 0.28 | 0.824 |
| CCcont | -0.51 | -0.438 |
| DS01 | 0.142 | 0.017 |
| DS02 | -0.161 | -0.786 |
| DS04 | 1.019 | 1.148 |
| DS0c | -1.777 | -0.828 |
| GP01 | -0.433 | -1.014 |
| GP02 | -1.32 | -1.224 |
| GP0c | 0.622 | -0.551 |
| NOD | -1.084 | -0.88 |
| NZO | 0.267 | 0.124 |
| PWK | -0.176 | -0.689 |
| H37Rv_KO_CtpC | -0.232 | 0.565 |
| H37Rv_KO_CtpD | 0.395 | 0.208 |
| H37Rv_KO_Rv1272 | -0.538 | 0.424 |
| H37Rv_KO_SugABC | 1.218 | 1.074 |
| H37Rv_KO_MbtN | -1.085 | 1.528 |
| Trans05 | 0.031 | -0.077 |
| macrophage_unactivated | -0.518 | 0.776 |
| IL1 | 0.786 | 0.863 |
| Rapamycin | -0.282 | -0.193 |
| Tcell | -0.639 | -1.124 |
| GMCSF | -0.283 | -0.383 |
| IFNab | -0.1 | 0.248 |
| IFNg | -0.553 | -1.029 |
| IFNg_GMCSF1 | 0.229 | -0.173 |
| Rv1432_day32 | -0.541 | -0.014 |
| Rv1565c_day32 | -0.373 | 0.362 |
| secA2_input | 0.374 | 0.202 |
| delta_Rv3594 | 0.395 | 0.906 |
| delta_Rv3717 | -0.068 | 0.593 |
| delta_Rv3811 | 0.355 | 1.148 |
| delta_Rv0954 | 0.712 | 0.747 |
| PonA1 | 0.268 | 0.683 |
| EccD1_KO | 1.45 | -0.191 |
| EspI_KO | 0.613 | 0.613 |
| PE35_KO | 1.87 | 0.368 |
| PPE68_KO | 1.779 | -0.269 |
| glycerol2 | -0.413 | -0.647 |
| lignocerate | -0.879 | -0.826 |
| oleate | 0.512 | -0.231 |
| phosphatidylcholine | -0.273 | -1.069 |
| acetate | -1.355 | 0.151 |
| glucAc | -1.912 | -1.242 |
| Rv0950ko | 0.847 | 0.479 |
| Rv1096ko | 1.098 | 0.48 |
| Rv3684ko | 1.801 | 0.544 |
| delta_otsA_trehalose | 1.676 | -0.455 |