Top 10 genes with highest correlation to Rv0581/vapB26:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1773c/- | (cc=0.5168) | info on Rv1773c/- |
| Rv2978c/- | (cc=0.4892) | info on Rv2978c/- |
| Rv0427c/xthA | (cc=0.4738) | info on Rv0427c/xthA |
| Rv2911/dacB2 | (cc=0.4706) | info on Rv2911/dacB2 |
| Rv3387/- | (cc=0.4672) | info on Rv3387/- |
| Rv0865/mog | (cc=0.4666) | info on Rv0865/mog |
| Rv2537c/aroD | (cc=0.4615) | info on Rv2537c/aroD |
| Rv0817c/- | (cc=0.4532) | info on Rv0817c/- |
| Rv2484c/- | (cc=0.4525) | info on Rv2484c/- |
| Rv2250A/- | (cc=0.4446) | info on Rv2250A/- |
Correlation of Rv0581/vapB26 with Rv2537c/aroD
Normalized LFCs for Rv0581/vapB26:
(description and provenance of datasets)
| Rv0581/vapB26 | Rv2537c/aroD | |
| Fe_supp_jason_reseq | -1.017 | 1.148 |
| low_pH_jason_reseq | -1.952 | -1.29 |
| NO_jason_reseq | 0.344 | 0.0 |
| B6_jason_reseq | -1.021 | -1.704 |
| MHCII_jason_reseq | -1.845 | -1.501 |
| Isoniazid02 | 0.457 | -0.167 |
| Rifampicin4 | 0.907 | -0.311 |
| Ethambutol3 | 0.716 | -0.14 |
| Meropenem3 | 0.643 | -0.138 |
| Vancomycin16 | 0.889 | 0.0 |
| Rv2680_day32 | 1.836 | 0.0 |
| H37Rv_KO_MarP | 0.025 | -1.662 |
| hypoxia_3wks | 0.75 | 0.459 |
| hypoxia_6wks | 1.084 | 0.464 |
| glycerol | -1.068 | -0.385 |
| cholesterol | -0.322 | -0.276 |
| AJ | -0.034 | 0.193 |
| Bibs02 | -2.073 | -0.348 |
| Bibs02c | 1.05 | -0.399 |
| BL6 | -0.603 | -0.238 |
| BL6a | 1.319 | 0.595 |
| BXD01 | -0.306 | 0.695 |
| BXD010 | -0.339 | 0.0 |
| BXD011 | -0.239 | 0.0 |
| BXD03 | 0.92 | 0.856 |
| BXD04 | -0.275 | 0.524 |
| BXD05 | -0.39 | -0.123 |
| BXD06 | -0.438 | 0.566 |
| BXD07 | 0.645 | 0.809 |
| BXD08 | 0.217 | 1.127 |
| BXD09 | -0.313 | 0.675 |
| CAST | 0.28 | -0.439 |
| CCcont | -0.51 | -0.285 |
| DS01 | 0.142 | -0.45 |
| DS02 | -0.161 | -0.414 |
| DS04 | 1.019 | 0.0 |
| DS0c | -1.777 | -0.413 |
| GP01 | -0.433 | -0.188 |
| GP02 | -1.32 | -0.159 |
| GP0c | 0.622 | -0.248 |
| NOD | -1.084 | -0.428 |
| NZO | 0.267 | -0.38 |
| PWK | -0.176 | -0.374 |
| H37Rv_KO_CtpC | -0.232 | 0.0 |
| H37Rv_KO_CtpD | 0.395 | 1.56 |
| H37Rv_KO_Rv1272 | -0.538 | -0.269 |
| H37Rv_KO_SugABC | 1.218 | 3.352 |
| H37Rv_KO_MbtN | -1.085 | -0.094 |
| Trans05 | 0.031 | 0.698 |
| macrophage_unactivated | -0.518 | 0.0 |
| IL1 | 0.786 | 0.0 |
| Rapamycin | -0.282 | 1.068 |
| Tcell | -0.639 | 0.209 |
| GMCSF | -0.283 | -0.177 |
| IFNab | -0.1 | 0.0 |
| IFNg | -0.553 | -0.369 |
| IFNg_GMCSF1 | 0.229 | 0.0 |
| Rv1432_day32 | -0.541 | -1.55 |
| Rv1565c_day32 | -0.373 | 0.0 |
| secA2_input | 0.374 | 0.628 |
| delta_Rv3594 | 0.395 | -1.071 |
| delta_Rv3717 | -0.068 | 0.378 |
| delta_Rv3811 | 0.355 | -0.564 |
| delta_Rv0954 | 0.712 | -0.398 |
| PonA1 | 0.268 | -1.154 |
| EccD1_KO | 1.45 | 1.23 |
| EspI_KO | 0.613 | 1.298 |
| PE35_KO | 1.87 | 0.971 |
| PPE68_KO | 1.779 | 0.486 |
| glycerol2 | -0.413 | -2.27 |
| lignocerate | -0.879 | -2.59 |
| oleate | 0.512 | -0.997 |
| phosphatidylcholine | -0.273 | -1.804 |
| acetate | -1.355 | -2.003 |
| glucAc | -1.912 | -3.156 |
| Rv0950ko | 0.847 | 0.247 |
| Rv1096ko | 1.098 | 0.0 |
| Rv3684ko | 1.801 | -0.593 |
| delta_otsA_trehalose | 1.676 | 0.544 |