Top 10 genes with highest correlation to Rv0581/vapB26:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1773c/- | (cc=0.5168) | info on Rv1773c/- |
| Rv2978c/- | (cc=0.4892) | info on Rv2978c/- |
| Rv0427c/xthA | (cc=0.4738) | info on Rv0427c/xthA |
| Rv2911/dacB2 | (cc=0.4706) | info on Rv2911/dacB2 |
| Rv3387/- | (cc=0.4672) | info on Rv3387/- |
| Rv0865/mog | (cc=0.4666) | info on Rv0865/mog |
| Rv2537c/aroD | (cc=0.4615) | info on Rv2537c/aroD |
| Rv0817c/- | (cc=0.4532) | info on Rv0817c/- |
| Rv2484c/- | (cc=0.4525) | info on Rv2484c/- |
| Rv2250A/- | (cc=0.4446) | info on Rv2250A/- |
Correlation of Rv0581/vapB26 with Rv2250A/-
Normalized LFCs for Rv0581/vapB26:
(description and provenance of datasets)
| Rv0581/vapB26 | Rv2250A/- | |
| Fe_supp_jason_reseq | -1.017 | -1.339 |
| low_pH_jason_reseq | -1.952 | -2.397 |
| NO_jason_reseq | 0.344 | 0.643 |
| B6_jason_reseq | -1.021 | 1.98 |
| MHCII_jason_reseq | -1.845 | -1.4 |
| Isoniazid02 | 0.457 | 1.609 |
| Rifampicin4 | 0.907 | 0.555 |
| Ethambutol3 | 0.716 | 0.421 |
| Meropenem3 | 0.643 | -0.153 |
| Vancomycin16 | 0.889 | 1.573 |
| Rv2680_day32 | 1.836 | 1.844 |
| H37Rv_KO_MarP | 0.025 | -0.207 |
| hypoxia_3wks | 0.75 | -1.176 |
| hypoxia_6wks | 1.084 | -1.576 |
| glycerol | -1.068 | -0.214 |
| cholesterol | -0.322 | -0.599 |
| AJ | -0.034 | -1.978 |
| Bibs02 | -2.073 | -1.733 |
| Bibs02c | 1.05 | -3.206 |
| BL6 | -0.603 | -2.156 |
| BL6a | 1.319 | -1.877 |
| BXD01 | -0.306 | -1.301 |
| BXD010 | -0.339 | -1.577 |
| BXD011 | -0.239 | -1.272 |
| BXD03 | 0.92 | -1.5 |
| BXD04 | -0.275 | -2.131 |
| BXD05 | -0.39 | -1.95 |
| BXD06 | -0.438 | -1.644 |
| BXD07 | 0.645 | -2.006 |
| BXD08 | 0.217 | -2.159 |
| BXD09 | -0.313 | -1.332 |
| CAST | 0.28 | -0.572 |
| CCcont | -0.51 | -2.574 |
| DS01 | 0.142 | -3.239 |
| DS02 | -0.161 | -3.151 |
| DS04 | 1.019 | 1.089 |
| DS0c | -1.777 | -3.521 |
| GP01 | -0.433 | -1.702 |
| GP02 | -1.32 | -1.434 |
| GP0c | 0.622 | -2.241 |
| NOD | -1.084 | 1.365 |
| NZO | 0.267 | -1.445 |
| PWK | -0.176 | -2.065 |
| H37Rv_KO_CtpC | -0.232 | -2.354 |
| H37Rv_KO_CtpD | 0.395 | -1.737 |
| H37Rv_KO_Rv1272 | -0.538 | -0.463 |
| H37Rv_KO_SugABC | 1.218 | -1.22 |
| H37Rv_KO_MbtN | -1.085 | -1.493 |
| Trans05 | 0.031 | 0.823 |
| macrophage_unactivated | -0.518 | -3.794 |
| IL1 | 0.786 | -1.293 |
| Rapamycin | -0.282 | -2.526 |
| Tcell | -0.639 | -1.421 |
| GMCSF | -0.283 | -3.174 |
| IFNab | -0.1 | -0.396 |
| IFNg | -0.553 | -2.51 |
| IFNg_GMCSF1 | 0.229 | -0.635 |
| Rv1432_day32 | -0.541 | 0.0 |
| Rv1565c_day32 | -0.373 | 1.322 |
| secA2_input | 0.374 | 0.202 |
| delta_Rv3594 | 0.395 | -0.661 |
| delta_Rv3717 | -0.068 | -1.388 |
| delta_Rv3811 | 0.355 | -3.771 |
| delta_Rv0954 | 0.712 | 1.682 |
| PonA1 | 0.268 | -1.773 |
| EccD1_KO | 1.45 | 3.848 |
| EspI_KO | 0.613 | 1.743 |
| PE35_KO | 1.87 | 3.36 |
| PPE68_KO | 1.779 | 2.038 |
| glycerol2 | -0.413 | -4.496 |
| lignocerate | -0.879 | -4.413 |
| oleate | 0.512 | -3.899 |
| phosphatidylcholine | -0.273 | -4.258 |
| acetate | -1.355 | -6.0 |
| glucAc | -1.912 | -4.351 |
| Rv0950ko | 0.847 | 0.971 |
| Rv1096ko | 1.098 | 0.844 |
| Rv3684ko | 1.801 | -0.727 |
| delta_otsA_trehalose | 1.676 | -2.076 |