Top 10 genes with highest correlation to Rv0578c/PE_PGRS7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1091/PE_PGRS22 | (cc=0.7327) | info on Rv1091/PE_PGRS22 |
| Rv2232/ptkA | (cc=0.6987) | info on Rv2232/ptkA |
| Rv3367/PE_PGRS51 | (cc=0.6871) | info on Rv3367/PE_PGRS51 |
| Rv1004c/- | (cc=0.6537) | info on Rv1004c/- |
| Rv3509c/ilvX | (cc=0.6284) | info on Rv3509c/ilvX |
| Rv1735c/- | (cc=0.6213) | info on Rv1735c/- |
| Rv3380c/- | (cc=0.6109) | info on Rv3380c/- |
| Rv3355c/- | (cc=0.6079) | info on Rv3355c/- |
| Rv2741/PE_PGRS47 | (cc=0.6056) | info on Rv2741/PE_PGRS47 |
| Rv3344c/PE_PGRS49 | (cc=0.5962) | info on Rv3344c/PE_PGRS49 |
Correlation of Rv0578c/PE_PGRS7 with Rv1004c/-
Normalized LFCs for Rv0578c/PE_PGRS7:
(description and provenance of datasets)
| Rv0578c/PE_PGRS7 | Rv1004c/- | |
| Fe_supp_jason_reseq | -2.133 | -0.445 |
| low_pH_jason_reseq | -0.806 | -0.674 |
| NO_jason_reseq | -0.99 | 0.039 |
| B6_jason_reseq | -0.628 | -0.394 |
| MHCII_jason_reseq | -0.418 | 0.324 |
| Isoniazid02 | -0.735 | -0.093 |
| Rifampicin4 | 0.42 | 0.165 |
| Ethambutol3 | 1.592 | 1.51 |
| Meropenem3 | 0.944 | 0.527 |
| Vancomycin16 | -0.271 | 0.379 |
| Rv2680_day32 | 0.172 | 0.138 |
| H37Rv_KO_MarP | 0.574 | 0.33 |
| hypoxia_3wks | -0.231 | 0.279 |
| hypoxia_6wks | -0.808 | -0.39 |
| glycerol | 0.238 | 0.714 |
| cholesterol | 0.276 | 0.292 |
| AJ | 0.983 | 0.81 |
| Bibs02 | 0.588 | 0.138 |
| Bibs02c | 0.828 | 0.493 |
| BL6 | -1.265 | -1.506 |
| BL6a | -0.739 | -0.036 |
| BXD01 | -0.89 | -0.184 |
| BXD010 | -0.64 | -0.421 |
| BXD011 | -0.87 | -0.985 |
| BXD03 | -0.464 | -0.423 |
| BXD04 | -0.796 | 0.212 |
| BXD05 | -0.386 | -0.41 |
| BXD06 | -1.211 | -0.718 |
| BXD07 | -0.788 | -0.274 |
| BXD08 | 0.107 | 0.151 |
| BXD09 | -0.702 | -1.141 |
| CAST | 0.095 | -0.232 |
| CCcont | -1.146 | -1.537 |
| DS01 | -0.101 | 0.429 |
| DS02 | 0.175 | 0.35 |
| DS04 | 0.624 | 1.043 |
| DS0c | -0.14 | -0.162 |
| GP01 | -0.31 | 0.82 |
| GP02 | -0.054 | 0.257 |
| GP0c | -0.113 | 0.349 |
| NOD | -0.583 | 0.013 |
| NZO | 0.0 | -0.863 |
| PWK | 0.269 | -0.402 |
| H37Rv_KO_CtpC | -0.511 | 0.048 |
| H37Rv_KO_CtpD | 0.606 | 0.852 |
| H37Rv_KO_Rv1272 | 0.141 | 0.042 |
| H37Rv_KO_SugABC | -0.37 | -0.087 |
| H37Rv_KO_MbtN | -0.481 | -0.348 |
| Trans05 | -0.056 | 0.422 |
| macrophage_unactivated | -1.891 | -1.032 |
| IL1 | -2.186 | -0.584 |
| Rapamycin | -2.569 | -1.132 |
| Tcell | -2.098 | -0.935 |
| GMCSF | -1.251 | -1.048 |
| IFNab | -2.851 | -1.56 |
| IFNg | -2.376 | -1.636 |
| IFNg_GMCSF1 | -1.882 | -1.477 |
| Rv1432_day32 | 1.064 | 0.799 |
| Rv1565c_day32 | -0.182 | -0.725 |
| secA2_input | 0.814 | -0.584 |
| delta_Rv3594 | 0.142 | -0.119 |
| delta_Rv3717 | -0.232 | 0.165 |
| delta_Rv3811 | -0.375 | 0.235 |
| delta_Rv0954 | -0.544 | 0.019 |
| PonA1 | -0.091 | -0.166 |
| EccD1_KO | -0.237 | -0.125 |
| EspI_KO | -0.536 | -0.054 |
| PE35_KO | -0.607 | -1.205 |
| PPE68_KO | -0.602 | -1.376 |
| glycerol2 | -1.852 | -0.448 |
| lignocerate | -2.21 | -0.492 |
| oleate | -1.528 | 0.539 |
| phosphatidylcholine | -1.852 | 0.09 |
| acetate | -2.135 | -0.637 |
| glucAc | -1.532 | -0.92 |
| Rv0950ko | -0.133 | -0.121 |
| Rv1096ko | 0.718 | -0.072 |
| Rv3684ko | 0.534 | -0.897 |
| delta_otsA_trehalose | -0.341 | -0.838 |