Top 10 genes with highest correlation to Rv0578c/PE_PGRS7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1091/PE_PGRS22 | (cc=0.7327) | info on Rv1091/PE_PGRS22 |
| Rv2232/ptkA | (cc=0.6987) | info on Rv2232/ptkA |
| Rv3367/PE_PGRS51 | (cc=0.6871) | info on Rv3367/PE_PGRS51 |
| Rv1004c/- | (cc=0.6537) | info on Rv1004c/- |
| Rv3509c/ilvX | (cc=0.6284) | info on Rv3509c/ilvX |
| Rv1735c/- | (cc=0.6213) | info on Rv1735c/- |
| Rv3380c/- | (cc=0.6109) | info on Rv3380c/- |
| Rv3355c/- | (cc=0.6079) | info on Rv3355c/- |
| Rv2741/PE_PGRS47 | (cc=0.6056) | info on Rv2741/PE_PGRS47 |
| Rv3344c/PE_PGRS49 | (cc=0.5962) | info on Rv3344c/PE_PGRS49 |
Correlation of Rv0578c/PE_PGRS7 with Rv1735c/-
Normalized LFCs for Rv0578c/PE_PGRS7:
(description and provenance of datasets)
| Rv0578c/PE_PGRS7 | Rv1735c/- | |
| Fe_supp_jason_reseq | -2.133 | -1.307 |
| low_pH_jason_reseq | -0.806 | -0.656 |
| NO_jason_reseq | -0.99 | 0.118 |
| B6_jason_reseq | -0.628 | -1.084 |
| MHCII_jason_reseq | -0.418 | 0.265 |
| Isoniazid02 | -0.735 | 1.275 |
| Rifampicin4 | 0.42 | 0.501 |
| Ethambutol3 | 1.592 | 0.916 |
| Meropenem3 | 0.944 | 0.264 |
| Vancomycin16 | -0.271 | 0.716 |
| Rv2680_day32 | 0.172 | 0.0 |
| H37Rv_KO_MarP | 0.574 | 0.559 |
| hypoxia_3wks | -0.231 | 0.578 |
| hypoxia_6wks | -0.808 | -1.825 |
| glycerol | 0.238 | -1.444 |
| cholesterol | 0.276 | -1.572 |
| AJ | 0.983 | 0.104 |
| Bibs02 | 0.588 | -0.66 |
| Bibs02c | 0.828 | -0.571 |
| BL6 | -1.265 | -2.2 |
| BL6a | -0.739 | -2.426 |
| BXD01 | -0.89 | -1.284 |
| BXD010 | -0.64 | -2.074 |
| BXD011 | -0.87 | -1.905 |
| BXD03 | -0.464 | -1.656 |
| BXD04 | -0.796 | 0.0 |
| BXD05 | -0.386 | -1.264 |
| BXD06 | -1.211 | -2.221 |
| BXD07 | -0.788 | -2.304 |
| BXD08 | 0.107 | -0.976 |
| BXD09 | -0.702 | -1.64 |
| CAST | 0.095 | 0.337 |
| CCcont | -1.146 | -2.554 |
| DS01 | -0.101 | -0.703 |
| DS02 | 0.175 | 0.928 |
| DS04 | 0.624 | 1.665 |
| DS0c | -0.14 | -0.102 |
| GP01 | -0.31 | 1.249 |
| GP02 | -0.054 | 1.619 |
| GP0c | -0.113 | -0.126 |
| NOD | -0.583 | 0.347 |
| NZO | 0.0 | -1.319 |
| PWK | 0.269 | 0.688 |
| H37Rv_KO_CtpC | -0.511 | 0.623 |
| H37Rv_KO_CtpD | 0.606 | -1.945 |
| H37Rv_KO_Rv1272 | 0.141 | 0.834 |
| H37Rv_KO_SugABC | -0.37 | -0.844 |
| H37Rv_KO_MbtN | -0.481 | -1.715 |
| Trans05 | -0.056 | -0.114 |
| macrophage_unactivated | -1.891 | -2.273 |
| IL1 | -2.186 | -3.283 |
| Rapamycin | -2.569 | -3.069 |
| Tcell | -2.098 | -2.076 |
| GMCSF | -1.251 | -2.778 |
| IFNab | -2.851 | -3.694 |
| IFNg | -2.376 | -2.536 |
| IFNg_GMCSF1 | -1.882 | -2.13 |
| Rv1432_day32 | 1.064 | 0.0 |
| Rv1565c_day32 | -0.182 | 1.238 |
| secA2_input | 0.814 | -0.429 |
| delta_Rv3594 | 0.142 | -0.832 |
| delta_Rv3717 | -0.232 | 0.165 |
| delta_Rv3811 | -0.375 | -0.61 |
| delta_Rv0954 | -0.544 | -1.499 |
| PonA1 | -0.091 | 0.092 |
| EccD1_KO | -0.237 | 0.793 |
| EspI_KO | -0.536 | -0.394 |
| PE35_KO | -0.607 | 0.435 |
| PPE68_KO | -0.602 | 1.901 |
| glycerol2 | -1.852 | -0.787 |
| lignocerate | -2.21 | -1.162 |
| oleate | -1.528 | -0.32 |
| phosphatidylcholine | -1.852 | -0.56 |
| acetate | -2.135 | -1.993 |
| glucAc | -1.532 | -2.721 |
| Rv0950ko | -0.133 | 1.001 |
| Rv1096ko | 0.718 | 1.454 |
| Rv3684ko | 0.534 | 1.15 |
| delta_otsA_trehalose | -0.341 | 0.564 |