Top 10 genes with highest correlation to Rv0549c/vapC3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1314c/- | (cc=0.4455) | info on Rv1314c/- |
| Rv3497c/mce4C | (cc=0.4166) | info on Rv3497c/mce4C |
| Rv2261c/- | (cc=0.4099) | info on Rv2261c/- |
| Rv3496c/mce4D | (cc=0.402) | info on Rv3496c/mce4D |
| Rv1492/mutA | (cc=0.399) | info on Rv1492/mutA |
| Rv2855/mtr | (cc=0.3922) | info on Rv2855/mtr |
| Rv1569/bioF1 | (cc=0.3871) | info on Rv1569/bioF1 |
| Rv3501c/yrbE4A | (cc=0.3816) | info on Rv3501c/yrbE4A |
| Rv1259/udgB | (cc=0.3792) | info on Rv1259/udgB |
| Rv3492c/- | (cc=0.3778) | info on Rv3492c/- |
Correlation of Rv0549c/vapC3 with Rv2261c/-
Normalized LFCs for Rv0549c/vapC3:
(description and provenance of datasets)
| Rv0549c/vapC3 | Rv2261c/- | |
| Fe_supp_jason_reseq | 2.234 | 0.185 |
| low_pH_jason_reseq | 0.201 | -0.308 |
| NO_jason_reseq | 0.226 | 0.131 |
| B6_jason_reseq | -0.805 | -0.141 |
| MHCII_jason_reseq | 1.217 | -0.214 |
| Isoniazid02 | 0.455 | -0.18 |
| Rifampicin4 | 0.677 | -1.597 |
| Ethambutol3 | 1.021 | -0.347 |
| Meropenem3 | 0.072 | -0.326 |
| Vancomycin16 | 0.597 | -0.204 |
| Rv2680_day32 | -0.305 | -1.854 |
| H37Rv_KO_MarP | 0.569 | 0.268 |
| hypoxia_3wks | 0.614 | 0.447 |
| hypoxia_6wks | -0.501 | 0.271 |
| glycerol | 0.162 | 0.999 |
| cholesterol | -0.631 | -0.333 |
| AJ | -1.788 | -0.692 |
| Bibs02 | -2.853 | -1.178 |
| Bibs02c | 1.585 | -0.236 |
| BL6 | 1.041 | -0.01 |
| BL6a | 1.012 | 0.132 |
| BXD01 | 0.276 | -0.203 |
| BXD010 | 0.318 | 0.452 |
| BXD011 | -0.415 | -0.636 |
| BXD03 | 0.594 | -0.199 |
| BXD04 | -0.098 | -0.344 |
| BXD05 | -0.915 | 0.07 |
| BXD06 | 0.619 | -0.208 |
| BXD07 | 0.587 | -0.054 |
| BXD08 | 1.437 | -0.041 |
| BXD09 | 0.77 | -0.123 |
| CAST | -1.138 | -0.641 |
| CCcont | 0.61 | -0.605 |
| DS01 | -0.948 | -0.802 |
| DS02 | -1.24 | -0.499 |
| DS04 | 0.299 | -0.32 |
| DS0c | -0.28 | -1.691 |
| GP01 | 0.433 | -0.388 |
| GP02 | 1.789 | 0.887 |
| GP0c | -0.091 | 0.105 |
| NOD | -1.31 | -0.452 |
| NZO | -2.159 | -1.865 |
| PWK | 0.158 | -0.666 |
| H37Rv_KO_CtpC | 0.304 | 1.43 |
| H37Rv_KO_CtpD | -2.21 | -1.138 |
| H37Rv_KO_Rv1272 | 0.432 | 0.862 |
| H37Rv_KO_SugABC | -0.254 | -0.459 |
| H37Rv_KO_MbtN | -1.051 | 0.735 |
| Trans05 | 1.153 | 0.403 |
| macrophage_unactivated | 0.366 | 0.972 |
| IL1 | 0.148 | -0.353 |
| Rapamycin | 0.525 | 0.172 |
| Tcell | 0.815 | 0.27 |
| GMCSF | 0.106 | 0.932 |
| IFNab | -0.45 | 0.529 |
| IFNg | -0.11 | 0.187 |
| IFNg_GMCSF1 | -1.854 | -0.676 |
| Rv1432_day32 | 0.804 | 0.909 |
| Rv1565c_day32 | -0.456 | 1.112 |
| secA2_input | 1.295 | 0.85 |
| delta_Rv3594 | 1.031 | 1.265 |
| delta_Rv3717 | 1.399 | 1.11 |
| delta_Rv3811 | -0.775 | 0.57 |
| delta_Rv0954 | 0.279 | 2.304 |
| PonA1 | 0.335 | 1.035 |
| EccD1_KO | 1.197 | 0.372 |
| EspI_KO | 0.667 | -0.918 |
| PE35_KO | 1.269 | -0.225 |
| PPE68_KO | 0.71 | 0.784 |
| glycerol2 | -0.121 | 0.649 |
| lignocerate | 0.651 | 0.128 |
| oleate | 0.569 | 0.788 |
| phosphatidylcholine | 0.377 | 0.487 |
| acetate | 0.725 | -0.504 |
| glucAc | 0.028 | -0.572 |
| Rv0950ko | -0.663 | 0.932 |
| Rv1096ko | 0.642 | 0.561 |
| Rv3684ko | 1.585 | 1.664 |
| delta_otsA_trehalose | 0.623 | 1.168 |