Top 10 genes with highest correlation to Rv0540/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1734c/- | (cc=0.6055) | info on Rv1734c/- |
| Rv0228/- | (cc=0.5973) | info on Rv0228/- |
| Rv2917/- | (cc=0.5972) | info on Rv2917/- |
| Rv0359/- | (cc=0.5969) | info on Rv0359/- |
| Rv1864c/- | (cc=0.5914) | info on Rv1864c/- |
| Rv2232/ptkA | (cc=0.5783) | info on Rv2232/ptkA |
| Rv0428c/- | (cc=0.5733) | info on Rv0428c/- |
| Rv1894c/- | (cc=0.5729) | info on Rv1894c/- |
| Rv2826c/- | (cc=0.5725) | info on Rv2826c/- |
| Rv1041c/- | (cc=0.5669) | info on Rv1041c/- |
Correlation of Rv0540/- with Rv1864c/-
Normalized LFCs for Rv0540/-:
(description and provenance of datasets)
| Rv0540/- | Rv1864c/- | |
| Fe_supp_jason_reseq | -0.074 | -0.41 |
| low_pH_jason_reseq | -1.096 | -0.714 |
| NO_jason_reseq | -0.312 | 0.144 |
| B6_jason_reseq | 0.833 | 0.828 |
| MHCII_jason_reseq | -0.506 | 0.613 |
| Isoniazid02 | 0.038 | 0.191 |
| Rifampicin4 | 0.07 | -0.504 |
| Ethambutol3 | 0.122 | -0.204 |
| Meropenem3 | 0.504 | 0.453 |
| Vancomycin16 | 2.406 | -0.446 |
| Rv2680_day32 | -0.833 | -0.117 |
| H37Rv_KO_MarP | -1.228 | 0.326 |
| hypoxia_3wks | 0.443 | 0.219 |
| hypoxia_6wks | -0.526 | 0.0 |
| glycerol | -0.278 | 0.63 |
| cholesterol | 0.973 | 0.442 |
| AJ | -0.424 | 0.225 |
| Bibs02 | 0.532 | 0.689 |
| Bibs02c | 1.634 | 0.947 |
| BL6 | -2.735 | -0.888 |
| BL6a | 0.796 | -0.09 |
| BXD01 | -1.446 | -0.944 |
| BXD010 | -2.013 | -1.013 |
| BXD011 | -0.05 | -0.441 |
| BXD03 | -2.821 | -1.166 |
| BXD04 | -2.096 | -1.502 |
| BXD05 | -0.796 | -0.299 |
| BXD06 | -1.093 | -0.577 |
| BXD07 | -1.76 | -0.976 |
| BXD08 | -1.75 | -1.974 |
| BXD09 | -1.849 | -0.983 |
| CAST | -0.606 | 0.045 |
| CCcont | -2.263 | -1.862 |
| DS01 | 0.866 | 0.922 |
| DS02 | -1.286 | 0.918 |
| DS04 | -0.937 | 0.379 |
| DS0c | 1.09 | 0.801 |
| GP01 | -1.97 | 0.489 |
| GP02 | -0.781 | 0.014 |
| GP0c | -0.893 | -0.898 |
| NOD | 0.719 | 0.039 |
| NZO | -0.558 | -0.153 |
| PWK | 0.239 | -0.337 |
| H37Rv_KO_CtpC | -1.285 | -0.534 |
| H37Rv_KO_CtpD | -2.232 | -0.21 |
| H37Rv_KO_Rv1272 | -0.194 | -1.216 |
| H37Rv_KO_SugABC | -0.4 | -0.929 |
| H37Rv_KO_MbtN | -0.379 | -0.261 |
| Trans05 | -0.2 | -0.378 |
| macrophage_unactivated | -2.743 | -1.509 |
| IL1 | -2.394 | -1.258 |
| Rapamycin | -2.667 | -0.865 |
| Tcell | -0.723 | -1.737 |
| GMCSF | -0.805 | -0.486 |
| IFNab | -3.459 | -1.684 |
| IFNg | -2.157 | -0.612 |
| IFNg_GMCSF1 | -1.678 | 0.496 |
| Rv1432_day32 | 0.0 | -0.33 |
| Rv1565c_day32 | -0.725 | -0.049 |
| secA2_input | -0.302 | -1.371 |
| delta_Rv3594 | -0.515 | -0.269 |
| delta_Rv3717 | -0.052 | -0.111 |
| delta_Rv3811 | -0.355 | -0.262 |
| delta_Rv0954 | -0.876 | -0.787 |
| PonA1 | -0.574 | -0.282 |
| EccD1_KO | -0.645 | 0.467 |
| EspI_KO | 0.288 | 0.371 |
| PE35_KO | -0.403 | 0.274 |
| PPE68_KO | -0.627 | -0.083 |
| glycerol2 | -0.263 | -0.244 |
| lignocerate | -0.8 | -0.156 |
| oleate | 0.343 | 0.322 |
| phosphatidylcholine | 0.049 | 0.098 |
| acetate | -0.79 | 0.148 |
| glucAc | -1.772 | -0.167 |
| Rv0950ko | 0.0 | 0.133 |
| Rv1096ko | 1.221 | 0.467 |
| Rv3684ko | 0.485 | 0.593 |
| delta_otsA_trehalose | -0.422 | 0.854 |