TnSeqCorr

Top 10 genes with highest correlation to Rv0533c/fabH:

update plotcorrelationlink to info on gene
Rv3273/- (cc=0.5376) info on Rv3273/-
Rv3377c/- (cc=0.5087) info on Rv3377c/-
Rv3660c/- (cc=0.4363) info on Rv3660c/-
Rv2835c/ugpA (cc=0.4151) info on Rv2835c/ugpA
Rv0532/PE_PGRS6 (cc=0.4101) info on Rv0532/PE_PGRS6
Rv0907/- (cc=0.3862) info on Rv0907/-
Rv0676c/mmpL5 (cc=0.3858) info on Rv0676c/mmpL5
Rv0656c/vapC6 (cc=0.3717) info on Rv0656c/vapC6
Rv0600c/- (cc=0.3588) info on Rv0600c/-
Rv2368c/phoH1 (cc=0.3587) info on Rv2368c/phoH1

Correlation of Rv0533c/fabH with Rv3660c/-

Normalized LFCs for Rv0533c/fabH:
(description and provenance of datasets)
Rv0533c/fabHRv3660c/-
Fe_supp_jason_reseq

-1.04

-1.174

low_pH_jason_reseq

-0.04

-0.39

NO_jason_reseq

-0.864

-1.68

B6_jason_reseq

-0.333

1.384

MHCII_jason_reseq

0.31

1.631

Isoniazid02

1.173

2.734

Rifampicin4

-1.286

0.926

Ethambutol3

1.629

3.112

Meropenem3

-0.326

-0.031

Vancomycin16

-0.082

0.687

Rv2680_day32

0.084

-0.642

H37Rv_KO_MarP

-0.126

-0.305

hypoxia_3wks

-0.024

0.148

hypoxia_6wks

-0.038

0.43

glycerol

-0.626

0.12

cholesterol

-0.218

-0.495

AJ

-0.086

-1.084

Bibs02

0.044

1.15

Bibs02c

-0.741

1.05

BL6

0.686

0.745

BL6a

-0.489

0.707

BXD01

0.081

-0.098

BXD010

-0.582

1.04

BXD011

0.518

-0.182

BXD03

-0.456

0.017

BXD04

-0.577

0.142

BXD05

-0.339

0.735

BXD06

-0.33

0.211

BXD07

-0.308

0.128

BXD08

0.522

1.08

BXD09

-0.093

1.01

CAST

-0.152

-1.784

CCcont

-0.124

1.045

DS01

-0.445

0.517

DS02

0.239

0.939

DS04

-0.561

-0.943

DS0c

0.102

1.856

GP01

-0.234

-0.257

GP02

-0.14

0.01

GP0c

0.493

0.442

NOD

0.472

-0.693

NZO

-0.228

0.185

PWK

-1.277

-1.469

H37Rv_KO_CtpC

0.633

-0.668

H37Rv_KO_CtpD

-0.449

-0.079

H37Rv_KO_Rv1272

0.538

-0.58

H37Rv_KO_SugABC

0.127

-1.619

H37Rv_KO_MbtN

-0.108

-0.938

Trans05

0.304

-0.661

macrophage_unactivated

-0.312

-0.328

IL1

0.673

0.059

Rapamycin

0.285

0.267

Tcell

-0.28

-0.74

GMCSF

0.214

0.61

IFNab

0.106

1.046

IFNg

0.216

0.158

IFNg_GMCSF1

0.361

0.0

Rv1432_day32

-0.641

-0.505

Rv1565c_day32

0.199

1.305

secA2_input

0.157

0.044

delta_Rv3594

-0.249

-0.702

delta_Rv3717

-0.084

-1.034

delta_Rv3811

0.254

-0.654

delta_Rv0954

-0.743

-0.284

PonA1

-0.586

-1.551

EccD1_KO

-0.447

-0.414

EspI_KO

-0.291

-0.234

PE35_KO

-0.779

0.0

PPE68_KO

-0.873

0.189

glycerol2

0.268

0.052

lignocerate

-0.129

1.073

oleate

-5.734

-2.535

phosphatidylcholine

0.329

0.783

acetate

0.0

2.173

glucAc

-0.375

2.153

Rv0950ko

-0.868

0.422

Rv1096ko

-0.606

0.489

Rv3684ko

-0.327

-1.385

delta_otsA_trehalose

0.139

0.19