TnSeqCorr

Top 10 genes with highest correlation to Rv0533c/fabH:

update plotcorrelationlink to info on gene
Rv3273/- (cc=0.5376) info on Rv3273/-
Rv3377c/- (cc=0.5087) info on Rv3377c/-
Rv3660c/- (cc=0.4363) info on Rv3660c/-
Rv2835c/ugpA (cc=0.4151) info on Rv2835c/ugpA
Rv0532/PE_PGRS6 (cc=0.4101) info on Rv0532/PE_PGRS6
Rv0907/- (cc=0.3862) info on Rv0907/-
Rv0676c/mmpL5 (cc=0.3858) info on Rv0676c/mmpL5
Rv0656c/vapC6 (cc=0.3717) info on Rv0656c/vapC6
Rv0600c/- (cc=0.3588) info on Rv0600c/-
Rv2368c/phoH1 (cc=0.3587) info on Rv2368c/phoH1

Correlation of Rv0533c/fabH with Rv3377c/-

Normalized LFCs for Rv0533c/fabH:
(description and provenance of datasets)
Rv0533c/fabHRv3377c/-
Fe_supp_jason_reseq

-1.04

0.504

low_pH_jason_reseq

-0.04

-0.413

NO_jason_reseq

-0.864

-0.404

B6_jason_reseq

-0.333

-0.658

MHCII_jason_reseq

0.31

0.467

Isoniazid02

1.173

-1.016

Rifampicin4

-1.286

-0.33

Ethambutol3

1.629

1.154

Meropenem3

-0.326

-0.213

Vancomycin16

-0.082

-0.788

Rv2680_day32

0.084

0.36

H37Rv_KO_MarP

-0.126

-0.075

hypoxia_3wks

-0.024

-0.742

hypoxia_6wks

-0.038

-0.664

glycerol

-0.626

-1.131

cholesterol

-0.218

-0.633

AJ

-0.086

0.734

Bibs02

0.044

-0.146

Bibs02c

-0.741

0.203

BL6

0.686

0.077

BL6a

-0.489

0.369

BXD01

0.081

0.033

BXD010

-0.582

0.197

BXD011

0.518

0.731

BXD03

-0.456

0.454

BXD04

-0.577

0.368

BXD05

-0.339

0.615

BXD06

-0.33

0.205

BXD07

-0.308

0.258

BXD08

0.522

0.458

BXD09

-0.093

0.509

CAST

-0.152

0.572

CCcont

-0.124

0.128

DS01

-0.445

0.175

DS02

0.239

-0.359

DS04

-0.561

0.211

DS0c

0.102

-0.264

GP01

-0.234

0.294

GP02

-0.14

-0.934

GP0c

0.493

-0.568

NOD

0.472

0.874

NZO

-0.228

0.631

PWK

-1.277

0.621

H37Rv_KO_CtpC

0.633

1.025

H37Rv_KO_CtpD

-0.449

1.376

H37Rv_KO_Rv1272

0.538

0.713

H37Rv_KO_SugABC

0.127

-0.052

H37Rv_KO_MbtN

-0.108

-0.337

Trans05

0.304

0.816

macrophage_unactivated

-0.312

0.328

IL1

0.673

-0.638

Rapamycin

0.285

-0.66

Tcell

-0.28

0.098

GMCSF

0.214

0.0

IFNab

0.106

-0.239

IFNg

0.216

-0.299

IFNg_GMCSF1

0.361

-0.299

Rv1432_day32

-0.641

-0.132

Rv1565c_day32

0.199

-0.081

secA2_input

0.157

0.053

delta_Rv3594

-0.249

-0.22

delta_Rv3717

-0.084

-0.306

delta_Rv3811

0.254

-0.454

delta_Rv0954

-0.743

-0.261

PonA1

-0.586

-0.256

EccD1_KO

-0.447

-0.138

EspI_KO

-0.291

-0.08

PE35_KO

-0.779

-0.041

PPE68_KO

-0.873

0.0

glycerol2

0.268

2.133

lignocerate

-0.129

-0.736

oleate

-5.734

-3.651

phosphatidylcholine

0.329

0.242

acetate

0.0

-0.201

glucAc

-0.375

0.355

Rv0950ko

-0.868

0.039

Rv1096ko

-0.606

-0.932

Rv3684ko

-0.327

-0.269

delta_otsA_trehalose

0.139

1.45