TnSeqCorr

Top 10 genes with highest correlation to Rv0533c/fabH:

update plotcorrelationlink to info on gene
Rv3273/- (cc=0.5376) info on Rv3273/-
Rv3377c/- (cc=0.5087) info on Rv3377c/-
Rv3660c/- (cc=0.4363) info on Rv3660c/-
Rv2835c/ugpA (cc=0.4151) info on Rv2835c/ugpA
Rv0532/PE_PGRS6 (cc=0.4101) info on Rv0532/PE_PGRS6
Rv0907/- (cc=0.3862) info on Rv0907/-
Rv0676c/mmpL5 (cc=0.3858) info on Rv0676c/mmpL5
Rv0656c/vapC6 (cc=0.3717) info on Rv0656c/vapC6
Rv0600c/- (cc=0.3588) info on Rv0600c/-
Rv2368c/phoH1 (cc=0.3587) info on Rv2368c/phoH1

Correlation of Rv0533c/fabH with Rv0532/PE_PGRS6

Normalized LFCs for Rv0533c/fabH:
(description and provenance of datasets)
Rv0533c/fabHRv0532/PE_PGRS6
Fe_supp_jason_reseq

-1.04

-0.549

low_pH_jason_reseq

-0.04

-0.708

NO_jason_reseq

-0.864

-0.029

B6_jason_reseq

-0.333

-0.538

MHCII_jason_reseq

0.31

1.151

Isoniazid02

1.173

3.355

Rifampicin4

-1.286

0.988

Ethambutol3

1.629

2.926

Meropenem3

-0.326

0.242

Vancomycin16

-0.082

0.926

Rv2680_day32

0.084

-0.23

H37Rv_KO_MarP

-0.126

0.095

hypoxia_3wks

-0.024

-0.163

hypoxia_6wks

-0.038

-0.355

glycerol

-0.626

0.162

cholesterol

-0.218

0.145

AJ

-0.086

0.165

Bibs02

0.044

0.268

Bibs02c

-0.741

0.505

BL6

0.686

-0.013

BL6a

-0.489

0.234

BXD01

0.081

0.0

BXD010

-0.582

-0.478

BXD011

0.518

-0.494

BXD03

-0.456

-0.149

BXD04

-0.577

0.225

BXD05

-0.339

-0.296

BXD06

-0.33

-0.028

BXD07

-0.308

0.215

BXD08

0.522

0.653

BXD09

-0.093

-0.138

CAST

-0.152

0.095

CCcont

-0.124

0.076

DS01

-0.445

0.19

DS02

0.239

0.578

DS04

-0.561

0.578

DS0c

0.102

1.065

GP01

-0.234

0.362

GP02

-0.14

-0.841

GP0c

0.493

-0.041

NOD

0.472

-0.583

NZO

-0.228

0.514

PWK

-1.277

-0.617

H37Rv_KO_CtpC

0.633

0.352

H37Rv_KO_CtpD

-0.449

-0.654

H37Rv_KO_Rv1272

0.538

-0.405

H37Rv_KO_SugABC

0.127

-0.415

H37Rv_KO_MbtN

-0.108

-0.022

Trans05

0.304

0.041

macrophage_unactivated

-0.312

0.644

IL1

0.673

0.572

Rapamycin

0.285

0.344

Tcell

-0.28

-0.349

GMCSF

0.214

0.356

IFNab

0.106

-0.039

IFNg

0.216

0.484

IFNg_GMCSF1

0.361

0.314

Rv1432_day32

-0.641

0.0

Rv1565c_day32

0.199

-0.422

secA2_input

0.157

-0.474

delta_Rv3594

-0.249

0.47

delta_Rv3717

-0.084

0.301

delta_Rv3811

0.254

0.076

delta_Rv0954

-0.743

-0.437

PonA1

-0.586

0.036

EccD1_KO

-0.447

-0.296

EspI_KO

-0.291

-0.593

PE35_KO

-0.779

-0.233

PPE68_KO

-0.873

-0.221

glycerol2

0.268

-0.025

lignocerate

-0.129

0.374

oleate

-5.734

-1.087

phosphatidylcholine

0.329

0.531

acetate

0.0

0.607

glucAc

-0.375

0.769

Rv0950ko

-0.868

0.202

Rv1096ko

-0.606

0.235

Rv3684ko

-0.327

0.36

delta_otsA_trehalose

0.139

-0.756