TnSeqCorr

Top 10 genes with highest correlation to Rv0533c/fabH:

update plotcorrelationlink to info on gene
Rv3273/- (cc=0.5376) info on Rv3273/-
Rv3377c/- (cc=0.5087) info on Rv3377c/-
Rv3660c/- (cc=0.4363) info on Rv3660c/-
Rv2835c/ugpA (cc=0.4151) info on Rv2835c/ugpA
Rv0532/PE_PGRS6 (cc=0.4101) info on Rv0532/PE_PGRS6
Rv0907/- (cc=0.3862) info on Rv0907/-
Rv0676c/mmpL5 (cc=0.3858) info on Rv0676c/mmpL5
Rv0656c/vapC6 (cc=0.3717) info on Rv0656c/vapC6
Rv0600c/- (cc=0.3588) info on Rv0600c/-
Rv2368c/phoH1 (cc=0.3587) info on Rv2368c/phoH1

Correlation of Rv0533c/fabH with Rv2835c/ugpA

Normalized LFCs for Rv0533c/fabH:
(description and provenance of datasets)
Rv0533c/fabHRv2835c/ugpA
Fe_supp_jason_reseq

-1.04

-0.041

low_pH_jason_reseq

-0.04

-0.644

NO_jason_reseq

-0.864

0.2

B6_jason_reseq

-0.333

0.337

MHCII_jason_reseq

0.31

0.0

Isoniazid02

1.173

0.0

Rifampicin4

-1.286

-0.236

Ethambutol3

1.629

0.452

Meropenem3

-0.326

-0.052

Vancomycin16

-0.082

0.573

Rv2680_day32

0.084

-0.16

H37Rv_KO_MarP

-0.126

-0.972

hypoxia_3wks

-0.024

-0.076

hypoxia_6wks

-0.038

-0.24

glycerol

-0.626

-0.976

cholesterol

-0.218

0.289

AJ

-0.086

-0.983

Bibs02

0.044

0.919

Bibs02c

-0.741

-1.011

BL6

0.686

0.481

BL6a

-0.489

-0.026

BXD01

0.081

-0.321

BXD010

-0.582

0.842

BXD011

0.518

1.01

BXD03

-0.456

1.22

BXD04

-0.577

0.561

BXD05

-0.339

0.79

BXD06

-0.33

0.594

BXD07

-0.308

0.429

BXD08

0.522

0.334

BXD09

-0.093

0.915

CAST

-0.152

-0.185

CCcont

-0.124

0.42

DS01

-0.445

0.031

DS02

0.239

1.126

DS04

-0.561

1.862

DS0c

0.102

-0.498

GP01

-0.234

-0.211

GP02

-0.14

0.175

GP0c

0.493

0.143

NOD

0.472

-0.908

NZO

-0.228

0.376

PWK

-1.277

0.099

H37Rv_KO_CtpC

0.633

1.068

H37Rv_KO_CtpD

-0.449

0.851

H37Rv_KO_Rv1272

0.538

-0.257

H37Rv_KO_SugABC

0.127

1.111

H37Rv_KO_MbtN

-0.108

-0.397

Trans05

0.304

1.207

macrophage_unactivated

-0.312

0.836

IL1

0.673

0.786

Rapamycin

0.285

-0.512

Tcell

-0.28

-0.283

GMCSF

0.214

0.565

IFNab

0.106

0.215

IFNg

0.216

-0.099

IFNg_GMCSF1

0.361

0.364

Rv1432_day32

-0.641

-0.666

Rv1565c_day32

0.199

0.521

secA2_input

0.157

0.21

delta_Rv3594

-0.249

0.379

delta_Rv3717

-0.084

0.451

delta_Rv3811

0.254

0.935

delta_Rv0954

-0.743

0.296

PonA1

-0.586

-0.283

EccD1_KO

-0.447

0.056

EspI_KO

-0.291

0.242

PE35_KO

-0.779

-0.053

PPE68_KO

-0.873

-0.173

glycerol2

0.268

-0.369

lignocerate

-0.129

0.917

oleate

-5.734

-2.137

phosphatidylcholine

0.329

0.466

acetate

0.0

0.788

glucAc

-0.375

0.933

Rv0950ko

-0.868

-0.953

Rv1096ko

-0.606

-1.252

Rv3684ko

-0.327

-0.632

delta_otsA_trehalose

0.139

0.436