TnSeqCorr

Top 10 genes with highest correlation to Rv0533c/fabH:

update plotcorrelationlink to info on gene
Rv3273/- (cc=0.5376) info on Rv3273/-
Rv3377c/- (cc=0.5087) info on Rv3377c/-
Rv3660c/- (cc=0.4363) info on Rv3660c/-
Rv2835c/ugpA (cc=0.4151) info on Rv2835c/ugpA
Rv0532/PE_PGRS6 (cc=0.4101) info on Rv0532/PE_PGRS6
Rv0907/- (cc=0.3862) info on Rv0907/-
Rv0676c/mmpL5 (cc=0.3858) info on Rv0676c/mmpL5
Rv0656c/vapC6 (cc=0.3717) info on Rv0656c/vapC6
Rv0600c/- (cc=0.3588) info on Rv0600c/-
Rv2368c/phoH1 (cc=0.3587) info on Rv2368c/phoH1

Correlation of Rv0533c/fabH with Rv0656c/vapC6

Normalized LFCs for Rv0533c/fabH:
(description and provenance of datasets)
Rv0533c/fabHRv0656c/vapC6
Fe_supp_jason_reseq

-1.04

-0.712

low_pH_jason_reseq

-0.04

-2.073

NO_jason_reseq

-0.864

-0.389

B6_jason_reseq

-0.333

-0.589

MHCII_jason_reseq

0.31

0.038

Isoniazid02

1.173

2.85

Rifampicin4

-1.286

-0.36

Ethambutol3

1.629

2.24

Meropenem3

-0.326

-0.066

Vancomycin16

-0.082

0.297

Rv2680_day32

0.084

1.475

H37Rv_KO_MarP

-0.126

0.999

hypoxia_3wks

-0.024

-0.582

hypoxia_6wks

-0.038

-0.031

glycerol

-0.626

-0.233

cholesterol

-0.218

1.065

AJ

-0.086

0.321

Bibs02

0.044

0.954

Bibs02c

-0.741

0.632

BL6

0.686

0.216

BL6a

-0.489

0.621

BXD01

0.081

-0.816

BXD010

-0.582

-1.384

BXD011

0.518

-0.454

BXD03

-0.456

-0.775

BXD04

-0.577

-0.67

BXD05

-0.339

0.262

BXD06

-0.33

-0.684

BXD07

-0.308

-0.591

BXD08

0.522

-1.098

BXD09

-0.093

-0.632

CAST

-0.152

0.994

CCcont

-0.124

-0.223

DS01

-0.445

0.139

DS02

0.239

0.058

DS04

-0.561

0.798

DS0c

0.102

0.14

GP01

-0.234

-0.54

GP02

-0.14

0.906

GP0c

0.493

-0.132

NOD

0.472

-0.125

NZO

-0.228

-0.137

PWK

-1.277

-0.266

H37Rv_KO_CtpC

0.633

-0.586

H37Rv_KO_CtpD

-0.449

0.544

H37Rv_KO_Rv1272

0.538

0.374

H37Rv_KO_SugABC

0.127

1.571

H37Rv_KO_MbtN

-0.108

-2.531

Trans05

0.304

-0.833

macrophage_unactivated

-0.312

-1.171

IL1

0.673

-0.362

Rapamycin

0.285

0.512

Tcell

-0.28

0.16

GMCSF

0.214

-0.795

IFNab

0.106

-0.051

IFNg

0.216

0.628

IFNg_GMCSF1

0.361

-0.779

Rv1432_day32

-0.641

1.091

Rv1565c_day32

0.199

-0.338

secA2_input

0.157

0.313

delta_Rv3594

-0.249

0.89

delta_Rv3717

-0.084

0.029

delta_Rv3811

0.254

0.851

delta_Rv0954

-0.743

1.058

PonA1

-0.586

0.754

EccD1_KO

-0.447

0.931

EspI_KO

-0.291

-0.391

PE35_KO

-0.779

-0.125

PPE68_KO

-0.873

-0.691

glycerol2

0.268

0.782

lignocerate

-0.129

1.975

oleate

-5.734

-2.597

phosphatidylcholine

0.329

0.857

acetate

0.0

1.729

glucAc

-0.375

1.403

Rv0950ko

-0.868

0.259

Rv1096ko

-0.606

0.971

Rv3684ko

-0.327

0.039

delta_otsA_trehalose

0.139

1.484