Top 10 genes with highest correlation to Rv0530/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1057/- | (cc=0.5674) | info on Rv1057/- |
| Rv0536/galE3 | (cc=0.5137) | info on Rv0536/galE3 |
| Rv2402/- | (cc=0.5029) | info on Rv2402/- |
| Rv0493c/- | (cc=0.496) | info on Rv0493c/- |
| Rv0113/gmhA | (cc=0.4933) | info on Rv0113/gmhA |
| Rv2748c/ftsK | (cc=0.4922) | info on Rv2748c/ftsK |
| Rv3294c/- | (cc=0.4876) | info on Rv3294c/- |
| Rv3786c/- | (cc=0.4871) | info on Rv3786c/- |
| Rv0134/ephF | (cc=0.4818) | info on Rv0134/ephF |
| Rv0442c/PPE10 | (cc=0.4707) | info on Rv0442c/PPE10 |
Correlation of Rv0530/- with Rv3294c/-
Normalized LFCs for Rv0530/-:
(description and provenance of datasets)
| Rv0530/- | Rv3294c/- | |
| Fe_supp_jason_reseq | -0.276 | 0.213 |
| low_pH_jason_reseq | -0.321 | 0.11 |
| NO_jason_reseq | 0.236 | -0.446 |
| B6_jason_reseq | 0.625 | 0.424 |
| MHCII_jason_reseq | 0.96 | 0.795 |
| Isoniazid02 | 0.292 | -0.179 |
| Rifampicin4 | -0.222 | -0.366 |
| Ethambutol3 | 0.582 | -0.288 |
| Meropenem3 | 0.265 | 0.437 |
| Vancomycin16 | -0.838 | -0.424 |
| Rv2680_day32 | -0.954 | -0.202 |
| H37Rv_KO_MarP | 0.12 | -0.038 |
| hypoxia_3wks | -0.57 | -0.024 |
| hypoxia_6wks | -0.23 | -0.111 |
| glycerol | -0.044 | -0.984 |
| cholesterol | -0.614 | -0.209 |
| AJ | 0.309 | 0.21 |
| Bibs02 | 0.351 | 0.454 |
| Bibs02c | 0.333 | 0.409 |
| BL6 | -0.4 | -0.772 |
| BL6a | 0.042 | -0.043 |
| BXD01 | -0.154 | -0.343 |
| BXD010 | -0.646 | -0.437 |
| BXD011 | -0.259 | -0.255 |
| BXD03 | -0.672 | -0.189 |
| BXD04 | 0.031 | -0.506 |
| BXD05 | -0.544 | -0.128 |
| BXD06 | -0.618 | -0.416 |
| BXD07 | -0.137 | -0.538 |
| BXD08 | -0.277 | -0.209 |
| BXD09 | -0.568 | -0.162 |
| CAST | 0.864 | 0.307 |
| CCcont | -0.12 | -0.627 |
| DS01 | 1.025 | 0.33 |
| DS02 | -0.154 | 0.457 |
| DS04 | 0.309 | 0.156 |
| DS0c | 0.787 | 1.004 |
| GP01 | 0.37 | 0.775 |
| GP02 | 1.026 | 0.497 |
| GP0c | 0.212 | 0.144 |
| NOD | 0.029 | 0.955 |
| NZO | 0.026 | 0.507 |
| PWK | 0.742 | 0.453 |
| H37Rv_KO_CtpC | -0.435 | -0.154 |
| H37Rv_KO_CtpD | 0.327 | 0.076 |
| H37Rv_KO_Rv1272 | -1.102 | 0.663 |
| H37Rv_KO_SugABC | 0.252 | -0.138 |
| H37Rv_KO_MbtN | 0.125 | 0.211 |
| Trans05 | -0.813 | 0.207 |
| macrophage_unactivated | -0.331 | -0.3 |
| IL1 | 0.208 | 0.163 |
| Rapamycin | 0.675 | -0.064 |
| Tcell | -0.469 | -0.212 |
| GMCSF | 0.364 | -0.037 |
| IFNab | -0.46 | -0.172 |
| IFNg | -0.059 | -0.374 |
| IFNg_GMCSF1 | 1.345 | 0.421 |
| Rv1432_day32 | 0.849 | 0.595 |
| Rv1565c_day32 | -0.518 | 0.24 |
| secA2_input | 0.333 | -0.538 |
| delta_Rv3594 | -0.393 | 0.07 |
| delta_Rv3717 | 0.345 | 0.185 |
| delta_Rv3811 | -0.256 | -0.024 |
| delta_Rv0954 | 0.224 | 0.243 |
| PonA1 | 0.391 | 0.248 |
| EccD1_KO | -0.444 | -0.214 |
| EspI_KO | -0.536 | -0.319 |
| PE35_KO | -0.099 | -0.426 |
| PPE68_KO | -0.55 | -0.653 |
| glycerol2 | 0.015 | 0.321 |
| lignocerate | 0.961 | 0.1 |
| oleate | -0.472 | 0.077 |
| phosphatidylcholine | 0.353 | 0.35 |
| acetate | 0.251 | -0.166 |
| glucAc | 0.367 | -0.252 |
| Rv0950ko | 0.244 | 0.513 |
| Rv1096ko | 0.29 | 0.531 |
| Rv3684ko | 0.39 | 0.537 |
| delta_otsA_trehalose | 0.888 | 1.61 |