Top 10 genes with highest correlation to Rv0530/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1057/- | (cc=0.5674) | info on Rv1057/- |
| Rv0536/galE3 | (cc=0.5137) | info on Rv0536/galE3 |
| Rv2402/- | (cc=0.5029) | info on Rv2402/- |
| Rv0493c/- | (cc=0.496) | info on Rv0493c/- |
| Rv0113/gmhA | (cc=0.4933) | info on Rv0113/gmhA |
| Rv2748c/ftsK | (cc=0.4922) | info on Rv2748c/ftsK |
| Rv3294c/- | (cc=0.4876) | info on Rv3294c/- |
| Rv3786c/- | (cc=0.4871) | info on Rv3786c/- |
| Rv0134/ephF | (cc=0.4818) | info on Rv0134/ephF |
| Rv0442c/PPE10 | (cc=0.4707) | info on Rv0442c/PPE10 |
Correlation of Rv0530/- with Rv2402/-
Normalized LFCs for Rv0530/-:
(description and provenance of datasets)
| Rv0530/- | Rv2402/- | |
| Fe_supp_jason_reseq | -0.276 | 0.208 |
| low_pH_jason_reseq | -0.321 | -0.125 |
| NO_jason_reseq | 0.236 | 0.021 |
| B6_jason_reseq | 0.625 | 0.748 |
| MHCII_jason_reseq | 0.96 | 1.001 |
| Isoniazid02 | 0.292 | 1.094 |
| Rifampicin4 | -0.222 | 0.125 |
| Ethambutol3 | 0.582 | 0.817 |
| Meropenem3 | 0.265 | 0.541 |
| Vancomycin16 | -0.838 | 0.146 |
| Rv2680_day32 | -0.954 | -0.218 |
| H37Rv_KO_MarP | 0.12 | 0.013 |
| hypoxia_3wks | -0.57 | -0.518 |
| hypoxia_6wks | -0.23 | -0.065 |
| glycerol | -0.044 | 0.61 |
| cholesterol | -0.614 | 0.13 |
| AJ | 0.309 | 0.763 |
| Bibs02 | 0.351 | 0.183 |
| Bibs02c | 0.333 | 0.582 |
| BL6 | -0.4 | -0.175 |
| BL6a | 0.042 | 0.1 |
| BXD01 | -0.154 | -0.618 |
| BXD010 | -0.646 | -0.64 |
| BXD011 | -0.259 | 0.114 |
| BXD03 | -0.672 | -0.307 |
| BXD04 | 0.031 | -0.187 |
| BXD05 | -0.544 | -0.639 |
| BXD06 | -0.618 | -0.401 |
| BXD07 | -0.137 | -0.527 |
| BXD08 | -0.277 | 0.02 |
| BXD09 | -0.568 | -0.403 |
| CAST | 0.864 | 0.556 |
| CCcont | -0.12 | -0.601 |
| DS01 | 1.025 | 0.46 |
| DS02 | -0.154 | -0.104 |
| DS04 | 0.309 | 0.902 |
| DS0c | 0.787 | 0.746 |
| GP01 | 0.37 | 0.153 |
| GP02 | 1.026 | 0.588 |
| GP0c | 0.212 | 0.495 |
| NOD | 0.029 | 0.679 |
| NZO | 0.026 | 0.301 |
| PWK | 0.742 | 0.631 |
| H37Rv_KO_CtpC | -0.435 | -0.68 |
| H37Rv_KO_CtpD | 0.327 | -0.192 |
| H37Rv_KO_Rv1272 | -1.102 | -0.231 |
| H37Rv_KO_SugABC | 0.252 | 0.288 |
| H37Rv_KO_MbtN | 0.125 | 0.327 |
| Trans05 | -0.813 | -0.577 |
| macrophage_unactivated | -0.331 | -0.341 |
| IL1 | 0.208 | -0.32 |
| Rapamycin | 0.675 | -0.178 |
| Tcell | -0.469 | -0.629 |
| GMCSF | 0.364 | -0.026 |
| IFNab | -0.46 | -0.484 |
| IFNg | -0.059 | -0.208 |
| IFNg_GMCSF1 | 1.345 | -0.405 |
| Rv1432_day32 | 0.849 | -0.155 |
| Rv1565c_day32 | -0.518 | -1.114 |
| secA2_input | 0.333 | -0.626 |
| delta_Rv3594 | -0.393 | -0.303 |
| delta_Rv3717 | 0.345 | -0.072 |
| delta_Rv3811 | -0.256 | -0.476 |
| delta_Rv0954 | 0.224 | 0.048 |
| PonA1 | 0.391 | 0.133 |
| EccD1_KO | -0.444 | 0.033 |
| EspI_KO | -0.536 | 0.057 |
| PE35_KO | -0.099 | -0.239 |
| PPE68_KO | -0.55 | 0.128 |
| glycerol2 | 0.015 | 0.633 |
| lignocerate | 0.961 | 1.305 |
| oleate | -0.472 | 0.06 |
| phosphatidylcholine | 0.353 | 0.878 |
| acetate | 0.251 | 1.48 |
| glucAc | 0.367 | 1.751 |
| Rv0950ko | 0.244 | -0.395 |
| Rv1096ko | 0.29 | -0.148 |
| Rv3684ko | 0.39 | 0.187 |
| delta_otsA_trehalose | 0.888 | -0.305 |